RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 FGF20Q9NP95 211 aaPredicted RBP14.68□□□□□ -0.06
DDX55-201ENST00000238146 MRPS18AQ9NVS2 196 aaKnown RBP14.68□□□□□ -0.06
DDX55-201ENST00000238146 FBXW2Q9UKT8 454 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 LOC102723532A0A0G2JNH3 316 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 WASHC1A8K0Z3 465 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 QSOX1O00391 747 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 PRRG1O14668 218 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 SLC43A1O75387 559 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 URODP06132 367 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 OR12D1P0DN82 309 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 ACP2P11117 423 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 CD79BP40259 229 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 PRLHRP49683 370 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 SMIM11AP58511 58 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 DCDC1P59894 354 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 CDK5Q00535 292 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 RAB40BQ12829 278 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 TCTN1Q2MV58 587 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 TYW3Q6IPR3 259 aaKnown RBP14.68□□□□□ -0.06
DDX55-201ENST00000238146 CD300LDQ6UXZ3 194 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 GDPD4Q6W3E5 623 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 CCDC28AQ8IWP9 274 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 CRIPAKQ8N1N5 446 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 RNFT2Q96EX2 444 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 GFM1Q96RP9 751 aaKnown RBP14.68□□□□□ -0.06
DDX55-201ENST00000238146 DCLRE1CQ96SD1 692 aaKnown RBP14.68□□□□□ -0.06
DDX55-201ENST00000238146 ATF6BQ99941 703 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 ABCG4Q9H172 646 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 GALNT9Q9HCQ5 603 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 ISYNA1Q9NPH2 558 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 SEC14L3Q9UDX4 400 aa14.68□□□□□ -0.06
DDX55-201ENST00000238146 HMGN4O00479 90 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 ACADMP11310 421 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 VIPR1P32241 457 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 EVI2BP34910 448 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 ZNF157P51786 506 aaPredicted RBP14.67□□□□□ -0.06
DDX55-201ENST00000238146 TPGS2Q68CL5 300 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 HTR3DQ70Z44 454 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 C6orf120Q7Z4R8 191 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 OR4K5Q8NGD3 323 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 SGPP1Q9BX95 441 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 A0A1W2PQ72 361 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 A0A1W2PRQ8 180 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 M0R3H8 397 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 ORC5O43913 435 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 NCR1O76036 304 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 SOD1P00441 154 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 LALBAP00709 142 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 CKMP06732 381 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 LIMS3P0CW19 117 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 LIMS4P0CW20 117 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 IFNA8P32881 189 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 MANFP55145 182 aaKnown RBP14.67□□□□□ -0.06
DDX55-201ENST00000238146 PRKCZQ05513 592 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 MAB21L1Q13394 359 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 TMEM220Q6QAJ8 160 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 NXPE4Q6UWF7 544 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 SHFQ7M4L6 423 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 SLC5A11Q8WWX8 675 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 ARHGAP9Q9BRR9 750 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 ZSCAN5AQ9BUG6 496 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 PLA2G12AQ9BZM1 189 aa14.67□□□□□ -0.06
DDX55-201ENST00000238146 TET1Q8NFU7 2136 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 TRDV1A0A1B0GX56 115 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 SHISA3A0PJX4 238 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 PRODHO43272 600 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 SH3BP5O60239 455 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 PLOD3O60568 738 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 MMP20O60882 483 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 SOX18P35713 384 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 AVPR1BP47901 424 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 TAP2Q03519 686 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 TMEM115Q12893 351 aaPredicted RBP14.66□□□□□ -0.06
DDX55-201ENST00000238146 SF3A2Q15428 464 aaKnown RBP14.66□□□□□ -0.06
DDX55-201ENST00000238146 DUSP6Q16828 381 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 WDR45BQ5MNZ6 344 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 TRILQ7L0X0 811 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 RNF180Q86T96 592 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 IQCHQ86VS3 1027 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 ZNF485Q8NCK3 441 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 OR5P2Q8WZ92 322 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 MAN2C1Q9NTJ4 1040 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 SLC23A1Q9UHI7 598 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 TEKT2Q9UIF3 430 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 GPR52Q9Y2T5 361 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 CDH10Q9Y6N8 788 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 LOC105371267A0A1B0GV96 52 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 PRAMEF27A3QJZ7 478 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 ISM1B1AKI9 464 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 CACNB4O00305 520 aaPredicted RBP14.66□□□□□ -0.06
DDX55-201ENST00000238146 NOS1APO75052 506 aaPredicted RBP14.66□□□□□ -0.06
DDX55-201ENST00000238146 IFI30P13284 250 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 ELNP15502 786 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 CA8P35219 290 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 RIN1Q13671 783 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 KIAA1211LQ6NV74 962 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 ADGRF3Q8IZF5 1079 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 SLC9A6Q92581 669 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 GLYATL1Q969I3 302 aa14.66□□□□□ -0.06
DDX55-201ENST00000238146 ZNF607Q96SK3 696 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms