RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 USP30Q70CQ3 517 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 ZNF367Q7RTV3 350 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 ADCK1Q86TW2 530 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 AMIGO1Q86WK6 493 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 PAQR7Q86WK9 346 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 NLGN4XQ8N0W4 816 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 CENPSQ8N2Z9 138 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 TMCO5AQ8N6Q1 288 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 ABTB1Q969K4 478 aaPredicted RBP15.25■□□□□ 0.03
UBE3D-201ENST00000237186 Q96MT0 163 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 ZNF681Q96N22 645 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 MACROD1Q9BQ69 325 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 SLC6A17Q9H1V8 727 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 LYARQ9NX58 379 aaKnown RBP15.25■□□□□ 0.03
UBE3D-201ENST00000237186 TRPC4Q9UBN4 977 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 APOBEC3BQ9UH17 382 aaKnown RBP15.25■□□□□ 0.03
UBE3D-201ENST00000237186 ENTPD4Q9Y227 616 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 SLC9A8Q9Y2E8 581 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 A3GALT2U3KPV4 340 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 GLOD5A6NK44 160 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 TLR4O00206 839 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 TOR1BO14657 336 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 CASC3O15234 703 aaKnown RBP15.25■□□□□ 0.03
UBE3D-201ENST00000237186 ASNA1O43681 348 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 CNOT3O75175 753 aaKnown RBP15.25■□□□□ 0.03
UBE3D-201ENST00000237186 PRKRAO75569 313 aaKnown RBP15.25■□□□□ 0.03
UBE3D-201ENST00000237186 ERAL1O75616 437 aaKnown RBP15.25■□□□□ 0.03
UBE3D-201ENST00000237186 EPPINO95925 133 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 PTHP01270 115 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 HMGN2P05204 90 aaKnown RBP15.25■□□□□ 0.03
UBE3D-201ENST00000237186 CHRM5P08912 532 aaPredicted RBP15.25■□□□□ 0.03
UBE3D-201ENST00000237186 COL9A1P20849 921 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 MPIP34949 423 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 CLK1P49759 484 aaKnown RBP15.25■□□□□ 0.03
UBE3D-201ENST00000237186 UGT2B15P54855 530 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 TGM3Q08188 693 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 FUT5Q11128 374 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 ITGADQ13349 1161 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 C12orf73Q69YU5 71 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 COMTD1Q86VU5 262 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 CCDC116Q8IYX3 515 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 VANGL1Q8TAA9 524 aaPredicted RBP15.25■□□□□ 0.03
UBE3D-201ENST00000237186 DCSTAMPQ9H295 470 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 SYNPO2LQ9H987 977 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 TBC1D29Q9UFV1 150 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 POM121BA6NF01 834 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 EMC8O43402 210 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 UGT2B17O75795 530 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 TP53P04637 393 aaPredicted RBP15.24■□□□□ 0.03
UBE3D-201ENST00000237186 RPLP0P05388 317 aaKnown RBP15.24■□□□□ 0.03
UBE3D-201ENST00000237186 CHRM4P08173 479 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 HOXB2P14652 356 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 RGS6P49758 472 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 PPP2CBP62714 309 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 PPP2CAP67775 309 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 PRR5P85299 388 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 DUSP2Q05923 314 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 PIN1Q13526 163 aaPredicted RBP15.24■□□□□ 0.03
UBE3D-201ENST00000237186 NDUFA9Q16795 377 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 LEXMQ3ZCV2 418 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 PLAG1Q6DJT9 500 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 NT5CQ8TCD5 201 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 LCN9Q8WX39 176 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 OR1E3Q8WZA6 343 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 PINK1Q9BXM7 581 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 FBXW2Q9UKT8 454 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 PCDHGA3Q9Y5H0 932 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 C5orf42Q9H799 3197 aa15.24■□□□□ 0.03
UBE3D-201ENST00000237186 M0R129 80 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 SYT5O00445 386 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 APBB3O95704 486 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 ASGR2P07307 311 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 GADD45AP24522 165 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 CERS1P27544 350 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 POU1F1P28069 291 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 MAN2A2P49641 1150 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 XKP51811 444 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 RPS15AP62244 130 aaKnown RBP15.23■□□□□ 0.03
UBE3D-201ENST00000237186 LASP1Q14847 261 aaKnown RBP15.23■□□□□ 0.03
UBE3D-201ENST00000237186 ARMCX4Q5H9R4 360 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 SLC25A30Q5SVS4 291 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 MEDAGQ5VYS4 303 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 RNLSQ5VYX0 342 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 C18orf63Q68DL7 685 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 USP43Q70EL4 1123 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 MTSS1LQ765P7 747 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 SZRD1Q7Z422 152 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 VN1R4Q7Z5H5 301 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 OR8J1Q8NGP2 316 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 NR4A3Q92570 626 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 SLC22A18Q96BI1 424 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 POLR2J3Q9H1A7 115 aaKnown RBP15.23■□□□□ 0.03
UBE3D-201ENST00000237186 MMP27Q9H306 513 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 KCNK12Q9HB15 430 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 MAN2C1Q9NTJ4 1040 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 GIMAP4Q9NUV9 329 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 NTMQ9P121 344 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 LIPT1Q9Y234 373 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 HEATR5BQ9P2D3 2071 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 CCDC85CA6NKD9 419 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms