RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 STARD5Q9NSY2 213 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 RHCGQ9UBD6 479 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 SLC22A14Q9Y267 594 aa10.64□□□□□ -0.71
MSH6-201ENST00000234420 FEZF1A0PJY2 475 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 ZNF850A8MQ14 1090 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 SERINC3Q13530 473 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 ACOT11Q8WXI4 607 aaPredicted RBP10.63□□□□□ -0.71
MSH6-201ENST00000234420 DZANK1Q9NVP4 752 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 OR6C2Q9NZP2 312 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 ASH2LQ9UBL3 628 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 C1orf167Q5SNV9 1468 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.63□□□□□ -0.71
MSH6-201ENST00000234420 CDC14CA4D256 554 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 F5H5P2 479 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 NPC1O15118 1278 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 EOMESO95936 686 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 HRGP04196 525 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 FGF1P05230 155 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 MAOBP27338 520 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 CAPSQ13938 189 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 PPP1R3AQ16821 1122 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 COQ5Q5HYK3 327 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 GLIS3Q8NEA6 775 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 OR51D1Q8NGF3 324 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 H1FXQ92522 213 aaKnown RBP10.63□□□□□ -0.71
MSH6-201ENST00000234420 SLC35A5Q9BS91 424 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 GPRC5BQ9NZH0 403 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 OR1A2Q9Y585 309 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 DIP2AQ14689 1571 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 RFXAPO00287 272 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 CRTAPO75718 401 aaPredicted RBP10.63□□□□□ -0.71
MSH6-201ENST00000234420 RPP40O75818 363 aaKnown RBP10.63□□□□□ -0.71
MSH6-201ENST00000234420 RAB8AP61006 207 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 CACNG1Q06432 222 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 APOBEC3HQ6NTF7 200 aaKnown RBP10.63□□□□□ -0.71
MSH6-201ENST00000234420 SMIM15Q7Z3B0 74 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 FAM3CQ92520 227 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 MRPL22Q9NWU5 206 aaKnown RBP10.63□□□□□ -0.71
MSH6-201ENST00000234420 GRHPRQ9UBQ7 328 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 TMPRSS11EQ9UL52 423 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 SMIM35A0A1B0GVV1 85 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 SLC22A5O76082 557 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 PTTG1O95997 202 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 PRPS2P11908 318 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 LMO2P25791 158 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 CRISP3P54108 245 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 DECR1Q16698 335 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 ERMP1Q7Z2K6 904 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 DIO2Q92813 273 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 OCSTAMPQ9BR26 566 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 PINK1Q9BXM7 581 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 ADAM19Q9H013 955 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 FAM198AQ9UFP1 575 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 CD207Q9UJ71 328 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 A0A087WZY1 265 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 SCGB2A1O75556 95 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 RPS24P62847 133 aaKnown RBP10.63□□□□□ -0.71
MSH6-201ENST00000234420 AVPI1Q5T686 147 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 ANKRD22Q5VYY1 191 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 KCTD20Q7Z5Y7 419 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 OR51G2Q8NGK0 314 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 TMEM74Q96NL1 305 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 PUS1Q9Y606 427 aaKnown RBP eCLIP10.63□□□□□ -0.71
MSH6-201ENST00000234420 ONECUT3O60422 494 aaPredicted RBP10.63□□□□□ -0.71
MSH6-201ENST00000234420 PABPC4LP0CB38 370 aaKnown RBP10.63□□□□□ -0.71
MSH6-201ENST00000234420 CAV2P51636 162 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 CSNK2A1P68400 391 aaPredicted RBP10.63□□□□□ -0.71
MSH6-201ENST00000234420 IRF9Q00978 393 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 BEX5Q5H9J7 111 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 CSNK2A3Q8NEV1 391 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 MOAP1Q96BY2 351 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 GMLQ99445 158 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 DEFB126Q9BYW3 111 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 FKRPQ9H9S5 495 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 NUDT4Q9NZJ9 180 aa10.63□□□□□ -0.71
MSH6-201ENST00000234420 UBE2J1Q9Y385 318 aaPredicted RBP10.63□□□□□ -0.71
MSH6-201ENST00000234420 ASCC3Q8N3C0 2202 aaKnown RBP10.63□□□□□ -0.71
MSH6-201ENST00000234420 FAM170BA6NMN3 283 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 CNTN5O94779 1100 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 DEFB110Q30KQ9 67 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 FIGNL1Q6PIW4 674 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 SERPINA12Q8IW75 414 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 BIRC7Q96CA5 298 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 MFFQ9GZY8 342 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 LGALS13Q9UHV8 139 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 PXDNLA1KZ92 1463 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 BCHEP06276 602 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 OPRL1P41146 370 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 RAB7AP51149 207 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 EEF1A2Q05639 463 aaKnown RBP10.62□□□□□ -0.71
MSH6-201ENST00000234420 RCAN2Q14206 197 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 SLC36A4Q6YBV0 504 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 IDO2Q6ZQW0 420 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 ZNF662Q6ZS27 426 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 ZNF551Q7Z340 670 aaPredicted RBP10.62□□□□□ -0.71
MSH6-201ENST00000234420 LRRTM4Q86VH4 590 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 TMPRSS12Q86WS5 348 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 VWA5B2Q8N398 1253 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 BANPQ8N9N5 519 aa10.62□□□□□ -0.71
MSH6-201ENST00000234420 ZBED3Q96IU2 234 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms