RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ZNF75CPQ92670 426 aaPredicted RBP10.49□□□□□ -0.73
SF3B6-201ENST00000233468 EXOSC8Q96B26 276 aaKnown RBP10.49□□□□□ -0.73
SF3B6-201ENST00000233468 MTERF3Q96E29 417 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 ZNF764Q96H86 408 aaPredicted RBP10.49□□□□□ -0.73
SF3B6-201ENST00000233468 FCRL1Q96LA6 429 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 SORT1Q99523 831 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 CDCP1Q9H5V8 836 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 CXorf21Q9HAI6 301 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 SLC35C2Q9NQQ7 365 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 NOP53Q9NZM5 478 aaKnown RBP10.49□□□□□ -0.73
SF3B6-201ENST00000233468 YARS2Q9Y2Z4 477 aaKnown RBP10.49□□□□□ -0.73
SF3B6-201ENST00000233468 PTGDR2Q9Y5Y4 395 aa10.49□□□□□ -0.73
SF3B6-201ENST00000233468 FER1L5A0AVI2 2057 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 MYOCOSA0A1B0GUC4 107 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 ATP6AP2A0A1C7CYW4 349 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 TTLL8A6PVC2 850 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 GABRR3A8MPY1 467 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 ATP6AP2O75787 350 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 WDPCPO95876 746 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 FEN1P39748 380 aaKnown RBP10.48□□□□□ -0.73
SF3B6-201ENST00000233468 CYB561P49447 251 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 MLF1P58340 268 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 ERVK-8P63133 956 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 RNF4P78317 190 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 PSPHP78330 225 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 OC90Q02509 493 aaPredicted RBP10.48□□□□□ -0.73
SF3B6-201ENST00000233468 EMX2Q04743 252 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 MAP4K2Q12851 820 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 ZNF169Q14929 603 aaPredicted RBP10.48□□□□□ -0.73
SF3B6-201ENST00000233468 NADK2Q4G0N4 442 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 C6orf136Q5SQH8 315 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 TICAM1Q8IUC6 712 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 WDR75Q8IWA0 830 aaKnown RBP10.48□□□□□ -0.73
SF3B6-201ENST00000233468 DND1Q8IYX4 353 aaKnown RBP10.48□□□□□ -0.73
SF3B6-201ENST00000233468 TAGAPQ8N103 731 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 ARMC10Q8N2F6 343 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 VWA5B2Q8N398 1253 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 KIF2BQ8N4N8 673 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 RBMXL3Q8N7X1 1067 aaKnown RBP10.48□□□□□ -0.73
SF3B6-201ENST00000233468 ZFP28Q8NHY6 868 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.48□□□□□ -0.732e-7■■■□□ 16.2
SF3B6-201ENST00000233468 PIWIL2Q8TC59 973 aaKnown RBP10.48□□□□□ -0.73
SF3B6-201ENST00000233468 ZNF721Q8TF20 911 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 TMEM125Q96AQ2 219 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 PPCDCQ96CD2 204 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 C5orf34Q96MH7 638 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 C7orf26Q96N11 449 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 BRINP2Q9C0B6 783 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 REEP4Q9H6H4 257 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 MEAF6Q9HAF1 191 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 ATAD3AQ9NVI7 634 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 MYOTQ9UBF9 498 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 HEY2Q9UBP5 337 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 PRODH2Q9UF12 536 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 ERVK-19Q9WJR5 959 aa10.48□□□□□ -0.73
SF3B6-201ENST00000233468 LRBAP50851 2863 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 WASHC1A8K0Z3 465 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 CAPN14A8MX76 684 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 TBX19O60806 448 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 PRAMEF2O60811 474 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 IGKV3-11P04433 115 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 BCKDHAP12694 445 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 LBPP18428 481 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 SDC1P18827 310 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 PRPS1L1P21108 318 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 TRHRP34981 398 aaPredicted RBP10.47□□□□□ -0.73
SF3B6-201ENST00000233468 TNFSF10P50591 281 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 HLCSP50747 726 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 SSR4P51571 173 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 NRG3P56975 720 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 OCRLQ01968 901 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 FUT7Q11130 342 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 CEBPEQ15744 281 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 INAQ16352 499 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 MPEG1Q2M385 716 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 LINC01559Q495D7 138 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 IL23RQ5VWK5 629 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 FAM219BQ5XKK7 198 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 SLC6A19Q695T7 634 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 FCRLBQ6BAA4 426 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 OPN5Q6U736 354 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 CCDC116Q8IYX3 515 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 BEST3Q8N1M1 668 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 SLC15A4Q8N697 577 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 TMEM178AQ8NBL3 297 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 FAM98AQ8NCA5 519 aaKnown RBP10.47□□□□□ -0.73
SF3B6-201ENST00000233468 SLC22A8Q8TCC7 542 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 ZNF675Q8TD23 568 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 THAP3Q8WTV1 239 aaPredicted RBP10.47□□□□□ -0.73
SF3B6-201ENST00000233468 CNRIP1Q96F85 164 aaPredicted RBP10.47□□□□□ -0.73
SF3B6-201ENST00000233468 ZBED6CLQ96FA7 236 aaPredicted RBP10.47□□□□□ -0.73
SF3B6-201ENST00000233468 MAGEB18Q96M61 343 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 ZNF681Q96N22 645 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 TSSK3Q96PN8 268 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 NUF2Q9BZD4 464 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 C20orf27Q9GZN8 174 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 ZNF395Q9H8N7 513 aaPredicted RBP10.47□□□□□ -0.73
SF3B6-201ENST00000233468 AKTIPQ9H8T0 292 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 ZBTB20Q9HC78 741 aaPredicted RBP10.47□□□□□ -0.73
SF3B6-201ENST00000233468 PNPOQ9NVS9 261 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms