RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 RGNQ15493 299 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 CARD16Q5EG05 197 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 PLEKHS1Q5SXH7 462 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 IRAK1BP1Q5VVH5 260 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 PSKH2Q96QS6 385 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 TCEAL7Q9BRU2 100 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 OR6C2Q9NZP2 312 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 SLC22A31A6NKX4 558 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 PPP6CO00743 305 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 MMP20O60882 483 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 PTNP21246 168 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 TUBB3Q13509 450 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 NKAPLQ5M9Q1 402 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 TPRG1Q6ZUI0 275 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 SLC46A3Q7Z3Q1 461 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 SCLYQ96I15 445 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 TAS2R8Q9NYW2 309 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 UNC119BA6NIH7 251 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 CPNE6O95741 557 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 SNAI1O95863 264 aaPredicted RBP13.18□□□□□ -0.3
HCFC2-201ENST00000229330 F2P00734 622 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 PCCBP05166 539 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 C4AP0C0L4 1744 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 C4BP0C0L5 1744 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 TRAPPC2P0DI81 140 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 TRAPPC2BP0DI82 140 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 ADORA3P0DMS8 318 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 LAMP1P11279 417 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 HLA-EP13747 358 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 KCNC1P48547 511 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 ART1P52961 327 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 TAZQ16635 292 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 DHRS4L2Q6PKH6 230 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 CFAP77Q6ZQR2 320 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 FBXO22Q8NEZ5 403 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 CPNE2Q96FN4 548 aaPredicted RBP13.18□□□□□ -0.3
HCFC2-201ENST00000229330 MFFQ9GZY8 342 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 POT1Q9NUX5 634 aa13.18□□□□□ -0.3
HCFC2-201ENST00000229330 BORCS7-ASMTA0A0B4J1R7 106 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 CYP17A1P05093 508 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 IGFALSP35858 605 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 HACD4Q5VWC8 232 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 ZNF534Q76KX8 674 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 ZNF584Q8IVC4 421 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 LAX1Q8IWV1 398 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 RBFOX1Q9NWB1 397 aaKnown RBP13.17□□□□□ -0.3
HCFC2-201ENST00000229330 B3GNT2Q9NY97 397 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 TAC3Q9UHF0 121 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 GPR52Q9Y2T5 361 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 TRBV2A0A0J9YWF9 115 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 ZNF878C9JN71 531 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 ADAM23O75077 832 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 ADH6P28332 368 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 PRDX3P30048 256 aaKnown RBP13.17□□□□□ -0.3
HCFC2-201ENST00000229330 FAM189A2Q15884 450 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 MPP7Q5T2T1 576 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 FAM69AQ5T7M9 428 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 AMZ2Q86W34 360 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 TMPRSS12Q86WS5 348 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 NAGSQ8N159 534 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 DNAJC22Q8N4W6 341 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 OR7G2Q8NG99 324 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 OR4K5Q8NGD3 323 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 PROKR1Q8TCW9 393 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 TESCQ96BS2 214 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 CLCC1Q96S66 551 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 PCYT2Q99447 389 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 ZNF416Q9BWM5 594 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 USP22Q9UPT9 525 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 TEX13DA0A0J9YY54 714 aaPredicted RBP13.17□□□□□ -0.3
HCFC2-201ENST00000229330 FGF19O95750 216 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 ADH1CP00326 375 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 NOVP48745 357 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 MLLT11Q13015 90 aaPredicted RBP13.17□□□□□ -0.3
HCFC2-201ENST00000229330 ARL14EPQ8N8R7 260 aaPredicted RBP13.17□□□□□ -0.3
HCFC2-201ENST00000229330 ANKK1Q8NFD2 765 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 C2orf15Q8WU43 125 aaKnown RBP13.17□□□□□ -0.3
HCFC2-201ENST00000229330 CENPOQ9BU64 300 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 ABCG4Q9H172 646 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 ATG5Q9H1Y0 275 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 SLC28A3Q9HAS3 691 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 DUS2Q9NX74 493 aaKnown RBP13.17□□□□□ -0.3
HCFC2-201ENST00000229330 NOX1Q9Y5S8 564 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 TRAPPC13A5PLN9 417 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 SLC16A5O15375 505 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 FABP7O15540 132 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 GIFP27352 417 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 ARF3P61204 181 aaPredicted RBP13.17□□□□□ -0.3
HCFC2-201ENST00000229330 ARF1P84077 181 aaKnown RBP13.17□□□□□ -0.3
HCFC2-201ENST00000229330 DBPQ10586 325 aaPredicted RBP13.17□□□□□ -0.3
HCFC2-201ENST00000229330 EIF2S3LQ2VIR3 472 aaKnown RBP13.17□□□□□ -0.3
HCFC2-201ENST00000229330 INAVAQ3KP66 663 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 CNTN4Q8IWV2 1026 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 BEST4Q8NFU0 473 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.17□□□□□ -0.3
HCFC2-201ENST00000229330 SLC7A6Q92536 515 aa13.17□□□□□ -0.3
HCFC2-201ENST00000229330 AHCYL2Q96HN2 611 aaKnown RBP13.17□□□□□ -0.3
HCFC2-201ENST00000229330 HAPLN1P10915 354 aaPredicted RBP13.16□□□□□ -0.3
HCFC2-201ENST00000229330 PCGF2P35227 344 aa13.16□□□□□ -0.3
HCFC2-201ENST00000229330 TAP2Q03519 686 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms