RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 BMP8AQ7Z5Y6 402 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 OXR1Q8N573 874 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 OR6C4Q8NGE1 309 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 SKA2Q8WVK7 121 aaPredicted RBP16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 GATAD2BQ8WXI9 593 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 SCMH1Q96GD3 660 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 HIST1H2AHQ96KK5 128 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 HIST1H2AJQ99878 128 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 H2AFJQ9BTM1 129 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 ATG10Q9H0Y0 220 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 ZFYVE1Q9HBF4 777 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 ZSCAN32Q9NX65 697 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 UBQLN2Q9UHD9 624 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 MAP4K5Q9Y4K4 846 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 GLYATL1P3A0A0U1RQE8 302 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 MPC2O95563 127 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 C6orf47O95873 294 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 PAHP00439 452 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 SOD1P00441 154 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 GLULP15104 373 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 PRKACAP17612 351 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 NNMTP40261 264 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 SGSHP51688 502 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 PUM1Q14671 1186 aaKnown RBP eCLIP16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 SYT14P1Q58G82 188 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 CD200R1LQ6Q8B3 271 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 ARSKQ6UWY0 536 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 FAM26EQ8N5C1 309 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 GOT1L1Q8NHS2 421 aaPredicted RBP16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 MYO19Q96H55 970 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 TMEM121BQ9BXQ6 578 aaPredicted RBP16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 GHITMQ9H3K2 345 aa16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 EXO1Q9UQ84 846 aaKnown RBP16.76■□□□□ 0.27
CDKN1B-201ENST00000228872 MGAT4DA6NG13 374 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 OR10H3O60404 316 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 CCT3P49368 545 aaKnown RBP16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 EPHA5P54756 1037 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 GAS1P54826 345 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 SPOUT1Q5T280 376 aaKnown RBP16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 ATXN7L2Q5T6C5 722 aaPredicted RBP16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 MZT2AQ6P582 158 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 TMEM81Q6P7N7 255 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 UNC5DQ6UXZ4 953 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 TMCO2Q7Z6W1 182 aaPredicted RBP16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 NXPE1Q8N323 547 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 ZNF578Q96N58 590 aaPredicted RBP16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 POLR2J3Q9H1A7 115 aaKnown RBP16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 ERVMER34-1Q9H9K5 563 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 SMAD6O43541 496 aaKnown RBP16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 CLDN11O75508 207 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 APOL3O95236 402 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 C8GP07360 202 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 ACRP10323 421 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 OPRD1P41143 372 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 ZNF33BQ06732 778 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 DBPQ10586 325 aaPredicted RBP16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 ARMC12Q5T9G4 340 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 LIPJQ5W064 366 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 RNF219Q5W0B1 726 aaPredicted RBP16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 ADGRF3Q8IZF5 1079 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 ZFP41Q8N8Y5 198 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 ZBTB44Q8NCP5 570 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 RBPMSQ93062 196 aaKnown RBP16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 ZNF582Q96NG8 517 aaPredicted RBP16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 RBP7Q96R05 134 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 CLEC4MQ9H2X3 399 aaPredicted RBP16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 ISYNA1Q9NPH2 558 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 ADAM30Q9UKF2 790 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 ANGPT4Q9Y264 503 aa16.75■□□□□ 0.27
CDKN1B-201ENST00000228872 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 TRDV1A0A1B0GX56 115 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 A8MX80 341 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 DHFRP00374 187 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 ARAFP10398 606 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 ELAVL4P26378 380 aaKnown RBP16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 HLA-FP30511 346 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 PTPN5P54829 565 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 PFN3P60673 137 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 HSF2Q03933 536 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 LRRC74AQ0VAA2 488 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 ZNF177Q13360 481 aaPredicted RBP16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 DSG2Q14126 1118 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 LGALSLQ3ZCW2 172 aaPredicted RBP16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 XKR6Q5GH73 641 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 TRIM40Q6P9F5 258 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 ASB18Q6ZVZ8 466 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 USP45Q70EL2 814 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 ADGRD2Q7Z7M1 963 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 LUZP2Q86TE4 346 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 OR5AK3PQ8NH89 298 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 CEP76Q8TAP6 659 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 ASB11Q8WXH4 323 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 P2RY13Q9BPV8 354 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 POLDIP3Q9BY77 421 aaKnown RBP16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 BHLHE41Q9C0J9 482 aaPredicted RBP16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 TNFRSF10DQ9UBN6 386 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 FKBP7Q9Y680 259 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 TMEM129A0AVI4 362 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 SHISA3A0PJX4 238 aa16.74■□□□□ 0.27
CDKN1B-201ENST00000228872 PIPSLA2A3N6 862 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms