RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 MAST2Q6P0Q8 1798 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 ASPDHA6ND91 283 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 SMLR1H3BR10 107 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 ASGR2P07307 311 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 GSTM3P21266 225 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 ACVR2AP27037 513 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 CASP3P42574 277 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 TSPAN5P62079 268 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 SP140Q13342 867 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 VEZF1Q14119 521 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 C4orf46Q504U0 113 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 PPP2R2DQ66LE6 453 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 ENPP7Q6UWV6 458 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 BTBD1Q9H0C5 482 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 MEN1O00255 615 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 B4GALT3O60512 393 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 SLC25A12O75746 678 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 GYPBP06028 91 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 STOMP27105 288 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 PTGS2P35354 604 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 VIPR2P41587 438 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 SIM1P81133 766 aaPredicted RBP13.07□□□□□ -0.32
NFKB1-201ENST00000226574 TRAM2Q15035 370 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 OXA1LQ15070 435 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 NXPE4Q6UWF7 544 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 CPOQ8IVL8 374 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 OR4F15Q8NGB8 312 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 ARSGQ96EG1 525 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 CACNG6Q9BXT2 260 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 NUDT15Q9NV35 164 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 CLEC4EQ9ULY5 219 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 GVINP1Q7Z2Y8 2422 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 TMEM202A6NGA9 273 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 FAM171A2A8MVW0 826 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 FAAHO00519 579 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 HPGDSO60760 199 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 ZNF91Q05481 1191 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 NTRK2Q16620 822 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 DCUN1D3Q8IWE4 304 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 LNX2Q8N448 690 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 HMGB4Q8WW32 186 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 ASB15Q8WXK1 588 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 OR5P2Q8WZ92 322 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 RFT1Q96AA3 541 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 SLC25A36Q96CQ1 311 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 FYTTD1Q96QD9 318 aaKnown RBP13.07□□□□□ -0.32
NFKB1-201ENST00000226574 DPH7Q9BTV6 452 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 SRRDQ9UH36 339 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 PFDN2Q9UHV9 154 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 BAIAP2Q9UQB8 552 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 ARAP2Q8WZ64 1704 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 FMO6PO60774 539 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 GPR37L1O60883 481 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 FGF18O76093 207 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 GNSP15586 552 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 HLA-FP30511 346 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 STXBP1P61764 594 aaKnown RBP13.07□□□□□ -0.32
NFKB1-201ENST00000226574 ZNF805Q5CZA5 627 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 MORN1Q5T089 497 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 JAZF1Q86VZ6 243 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 SERPINA12Q8IW75 414 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 CCDC28AQ8IWP9 274 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 DNAJC5GQ8N7S2 189 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 OR8S1Q8NH09 359 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 ZNF354BQ96LW1 612 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 NEDD4LQ96PU5 975 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 RNF121Q9H920 327 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 CALML5Q9NZT1 146 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 B3GNT3Q9Y2A9 372 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 SLC45A1Q9Y2W3 748 aa13.07□□□□□ -0.32
NFKB1-201ENST00000226574 B4GALT2O60909 372 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 DNASE1P24855 282 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 ADH7P40394 386 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 DUSP7Q16829 419 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 RBM45Q8IUH3 476 aaKnown RBP13.06□□□□□ -0.32
NFKB1-201ENST00000226574 CSF3RQ99062 836 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 SPHK2Q9NRA0 654 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 ERVW-1Q9UQF0 538 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 OR52A4PA6NMU1 304 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 FAM155AB1AL88 458 aaPredicted RBP13.06□□□□□ -0.32
NFKB1-201ENST00000226574 ITGAMP11215 1152 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 SSTR2P30874 369 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 HOXC13P31276 330 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 AHRP35869 848 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 TGFBR2P37173 567 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 SLC14A1Q13336 389 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 SNTB2Q13425 540 aaKnown RBP13.06□□□□□ -0.32
NFKB1-201ENST00000226574 TBCEQ15813 527 aaPredicted RBP13.06□□□□□ -0.32
NFKB1-201ENST00000226574 GFOD2Q3B7J2 385 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 AGAP7PQ5VUJ5 663 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 ZC3H14Q6PJT7 736 aaKnown RBP13.06□□□□□ -0.32
NFKB1-201ENST00000226574 PAQR6Q6TCH4 344 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 ANKK1Q8NFD2 765 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 CLSTN3Q9BQT9 956 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 KLHL31Q9H511 634 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 STOML2Q9UJZ1 356 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 NPIPA5A0A0B4J1W7 369 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 MCIDASD6RGH6 385 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 NPIPA7E9PJI5 369 aa13.06□□□□□ -0.32
NFKB1-201ENST00000226574 NPIPA8P0DM63 369 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms