RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 CPSF7Q8N684 471 aaKnown RBP16.72■□□□□ 0.27
PFN1-201ENST00000225655 POGLUT1Q8NBL1 392 aa16.72■□□□□ 0.27
PFN1-201ENST00000225655 NCLNQ969V3 563 aa16.72■□□□□ 0.27
PFN1-201ENST00000225655 APIPQ96GX9 242 aa16.72■□□□□ 0.27
PFN1-201ENST00000225655 ZNF717Q9BY31 904 aaPredicted RBP16.72■□□□□ 0.27
PFN1-201ENST00000225655 NUF2Q9BZD4 464 aa16.72■□□□□ 0.27
PFN1-201ENST00000225655 WBP11Q9Y2W2 641 aaKnown RBP16.72■□□□□ 0.27
PFN1-201ENST00000225655 KLF13Q9Y2Y9 288 aaPredicted RBP16.72■□□□□ 0.27
PFN1-201ENST00000225655 PTGDR2Q9Y5Y4 395 aa16.72■□□□□ 0.27
PFN1-201ENST00000225655 LSM1O15116 133 aaKnown RBP16.71■□□□□ 0.27
PFN1-201ENST00000225655 CTNSO60931 367 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 PEX11AO75192 247 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 ITGA10O75578 1167 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 GBAP04062 536 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 ESRRAP11474 423 aaPredicted RBP16.71■□□□□ 0.27
PFN1-201ENST00000225655 DDX5P17844 614 aaKnown RBP16.71■□□□□ 0.27
PFN1-201ENST00000225655 AGAP20933 346 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 ADORA2A-AS1P86434 159 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 GUCY1A3Q02108 690 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 TNFRSF17Q02223 184 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 ZNF763Q0D2J5 394 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 HEPACAMQ14CZ8 416 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 SMU1Q2TAY7 513 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 CLNKQ7Z7G1 428 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 TMEM156Q8N614 296 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 FNDC5Q8NAU1 212 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 PPP1R36Q96LQ0 422 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 CSF3RQ99062 836 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 MAPKAP1Q9BPZ7 522 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 SIKE1Q9BRV8 207 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 RUBCNLQ9H714 662 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 MEAF6Q9HAF1 191 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 KCMF1Q9P0J7 381 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 EIF3LQ9Y262 564 aaKnown RBP16.71■□□□□ 0.27
PFN1-201ENST00000225655 CCL27Q9Y4X3 112 aa16.71■□□□□ 0.27
PFN1-201ENST00000225655 ABCA12Q86UK0 2595 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 ATP6AP2A0A1C7CYW4 349 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 KLRC4-KLRK1H3BQV0 150 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 TMPRSS11DO60235 418 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 ATP6AP2O75787 350 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 ZFAND5O76080 213 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 TGDSO95455 350 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 VIMP08670 466 aaKnown RBP16.7■□□□□ 0.26
PFN1-201ENST00000225655 PRF1P14222 555 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 PCSK2P16519 638 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 HTR1EP28566 365 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 GRNP28799 593 aaKnown RBP16.7■□□□□ 0.26
PFN1-201ENST00000225655 MEOX1P50221 254 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 SMSP52788 366 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 STX4Q12846 297 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 ZNF630Q2M218 657 aaPredicted RBP16.7■□□□□ 0.26
PFN1-201ENST00000225655 FAM219BQ5XKK7 198 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 OR52E8Q6IFG1 317 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 MRM1Q6IN84 353 aaKnown RBP16.7■□□□□ 0.26
PFN1-201ENST00000225655 NOXRED1Q6NXP6 359 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 Q6ZSR9 355 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 ACAD11Q709F0 780 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 IKBIPQ70UQ0 350 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 SULF2Q8IWU5 870 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 CHERPQ8IWX8 916 aaKnown RBP16.7■□□□□ 0.26
PFN1-201ENST00000225655 FAM9CQ8IZT9 166 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 CYP4Z2PQ8N1L4 340 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 TMEM132CQ8N3T6 1108 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 OR2T11Q8NH01 316 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 TANKQ92844 425 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 EBPLQ9BY08 206 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 CCDC134Q9H6E4 229 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 RPF2Q9H7B2 306 aaKnown RBP16.7■□□□□ 0.26
PFN1-201ENST00000225655 SLCO1B3Q9NPD5 702 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 CHST11Q9NPF2 352 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 PSME2Q9UL46 239 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 YARS2Q9Y2Z4 477 aaKnown RBP16.7■□□□□ 0.26
PFN1-201ENST00000225655 MEMO1Q9Y316 297 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 POLR3HQ9Y535 204 aaPredicted RBP16.7■□□□□ 0.26
PFN1-201ENST00000225655 CLCA3PQ9Y6N3 262 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 USH1CQ9Y6N9 552 aa16.7■□□□□ 0.26
PFN1-201ENST00000225655 LRBAP50851 2863 aa16.69■□□□□ 0.26
PFN1-201ENST00000225655 C1orf226A1L170 272 aa16.69■□□□□ 0.26
PFN1-201ENST00000225655 PROM1O43490 865 aa16.69■□□□□ 0.26
PFN1-201ENST00000225655 IFNA16P05015 189 aa16.69■□□□□ 0.26
PFN1-201ENST00000225655 TROVE2P10155 538 aaKnown RBP eCLIP16.69■□□□□ 0.262e-7■□□□□ 11.1
PFN1-201ENST00000225655 ABOP16442 354 aa16.69■□□□□ 0.26
PFN1-201ENST00000225655 LBPP18428 481 aa16.69■□□□□ 0.26
PFN1-201ENST00000225655 ASMTP46597 345 aa16.69■□□□□ 0.26
PFN1-201ENST00000225655 SSR4P51571 173 aa16.69■□□□□ 0.26
PFN1-201ENST00000225655 HNRNPH2P55795 449 aaKnown RBP16.69■□□□□ 0.26
PFN1-201ENST00000225655 BIKQ13323 160 aa16.69■□□□□ 0.26
PFN1-201ENST00000225655 NDUFAF5Q5TEU4 345 aa16.69■□□□□ 0.26
PFN1-201ENST00000225655 MORN4Q8NDC4 146 aa16.69■□□□□ 0.26
PFN1-201ENST00000225655 CDC26Q8NHZ8 85 aa16.69■□□□□ 0.26
PFN1-201ENST00000225655 PTPMT1Q8WUK0 201 aaPredicted RBP16.69■□□□□ 0.26
PFN1-201ENST00000225655 DAZLQ92904 295 aaKnown RBP16.69■□□□□ 0.26
PFN1-201ENST00000225655 ALOXE3Q9BYJ1 711 aa16.69■□□□□ 0.26
PFN1-201ENST00000225655 NOP53Q9NZM5 478 aaKnown RBP16.69■□□□□ 0.26
PFN1-201ENST00000225655 ATG4BQ9Y4P1 393 aa16.69■□□□□ 0.26
PFN1-201ENST00000225655 ASB4Q9Y574 426 aa16.69■□□□□ 0.26
PFN1-201ENST00000225655 TMEM200CA6NKL6 621 aa16.68■□□□□ 0.26
PFN1-201ENST00000225655 ENO4A6NNW6 628 aa16.68■□□□□ 0.26
PFN1-201ENST00000225655 PEX1O43933 1283 aa16.68■□□□□ 0.26
PFN1-201ENST00000225655 PRKNO60260 465 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms