RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 ASIC5Q9NY37 505 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 CNOT2Q9NZN8 540 aaKnown RBP13.59□□□□□ -0.23
SFXN3-201ENST00000224807 TRPM5Q9NZQ8 1165 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 H7C0S8 307 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 LGALS8O00214 317 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 PRKRAO75569 313 aaKnown RBP13.59□□□□□ -0.23
SFXN3-201ENST00000224807 RAB36O95755 333 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 HOXB6P17509 224 aaKnown RBP13.59□□□□□ -0.23
SFXN3-201ENST00000224807 GIFP27352 417 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 CTSCP53634 463 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 EPHA5P54756 1037 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 RHAGQ02094 409 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 OC90Q02509 493 aaPredicted RBP13.59□□□□□ -0.23
SFXN3-201ENST00000224807 GPR176Q14439 515 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 MPEG1Q2M385 716 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 HYAL4Q2M3T9 481 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 SFRP4Q6FHJ7 346 aaPredicted RBP13.59□□□□□ -0.23
SFXN3-201ENST00000224807 TCTN3Q6NUS6 607 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 PODNL1Q6PEZ8 512 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 ARL9Q6T311 187 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 ZNF730Q6ZMV8 503 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 OR4K5Q8NGD3 323 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 OR51G2Q8NGK0 314 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 OR8J1Q8NGP2 316 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 GANCQ8TET4 914 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 SLC38A5Q8WUX1 472 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 AP3S1Q92572 193 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 FUBP3Q96I24 572 aaKnown RBP eCLIP13.59□□□□□ -0.23
SFXN3-201ENST00000224807 B4GALT6Q9UBX8 382 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 RWDD3Q9Y3V2 267 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 PLXNA4Q9HCM2 1894 aa13.59□□□□□ -0.23
SFXN3-201ENST00000224807 CPSF4LA6NMK7 179 aaKnown RBP13.58□□□□□ -0.23
SFXN3-201ENST00000224807 ERAL1O75616 437 aaKnown RBP13.58□□□□□ -0.23
SFXN3-201ENST00000224807 OAZ2O95190 189 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 SLC2A10O95528 541 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 CFDP00746 253 aaPredicted RBP13.58□□□□□ -0.23
SFXN3-201ENST00000224807 IFNA14P01570 189 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 C1SP09871 688 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 NR2F1P10589 423 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 PRKACAP17612 351 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 RHCEP18577 417 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 ELAVL4P26378 380 aaKnown RBP13.58□□□□□ -0.23
SFXN3-201ENST00000224807 SERPINA4P29622 427 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 MVDP53602 400 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 RAB14P61106 215 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 SLC3A1Q07837 685 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 NTRK2Q16620 822 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 MACC1Q6ZN28 852 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 Q6ZVU0 165 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 TRMT11Q7Z4G4 463 aaKnown RBP13.58□□□□□ -0.23
SFXN3-201ENST00000224807 SERHL2Q9H4I8 314 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 REEP4Q9H6H4 257 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 MED20Q9H944 212 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 C1GALT1Q9NS00 363 aa13.58□□□□□ -0.23
SFXN3-201ENST00000224807 CHD5Q8TDI0 1954 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 ZNF840PA6NDX5 716 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 IGLV3-27P01718 113 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 CD70P32970 193 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 TALDO1P37837 337 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 DGKGP49619 791 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 WNT4P56705 351 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 BNC1Q01954 994 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 MLLT11Q13015 90 aaPredicted RBP13.58□□□□□ -0.24
SFXN3-201ENST00000224807 TAF1CQ15572 869 aaPredicted RBP13.58□□□□□ -0.24
SFXN3-201ENST00000224807 SPOUT1Q5T280 376 aaKnown RBP13.58□□□□□ -0.24
SFXN3-201ENST00000224807 FCRLBQ6BAA4 426 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 RAET1GQ6H3X3 334 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 ZNF767PQ75MW2 155 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 C9orf62Q8N4C0 152 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 CHCHD4Q8N4Q1 142 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 PROKR2Q8NFJ6 384 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 BBS1Q8NFJ9 593 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 OR52N2Q8NGI0 321 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 SORCS1Q8WY21 1168 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.58□□□□□ -0.24
SFXN3-201ENST00000224807 RGS17Q9UGC6 210 aaPredicted RBP13.58□□□□□ -0.24
SFXN3-201ENST00000224807 NTNG1Q9Y2I2 539 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 KCNE2Q9Y6J6 123 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 IQCMA0A1B0GVH7 501 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 SH3D21A4FU49 640 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 E9PQ18 207 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 PRMT3O60678 531 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 RFPL3O75679 317 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 MT-ND4P03905 459 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 ATP1B2P14415 290 aaPredicted RBP13.58□□□□□ -0.24
SFXN3-201ENST00000224807 STXBP1P61764 594 aaKnown RBP13.58□□□□□ -0.24
SFXN3-201ENST00000224807 ZNF763Q0D2J5 394 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 ZBTB37Q5TC79 503 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 RETSATQ6NUM9 610 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 CFAP77Q6ZQR2 320 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 PRSS45Q7RTY3 260 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 BOLLQ8N9W6 283 aaKnown RBP13.58□□□□□ -0.24
SFXN3-201ENST00000224807 CHST14Q8NCH0 376 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 AP2M1Q96CW1 435 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 MRPL9Q9BYD2 267 aaKnown RBP13.58□□□□□ -0.24
SFXN3-201ENST00000224807 GPBP1L1Q9HC44 474 aaPredicted RBP13.58□□□□□ -0.24
SFXN3-201ENST00000224807 PAK6Q9NQU5 681 aaPredicted RBP13.58□□□□□ -0.24
SFXN3-201ENST00000224807 OR6C2Q9NZP2 312 aa13.58□□□□□ -0.24
SFXN3-201ENST00000224807 LSM2Q9Y333 95 aaKnown RBP13.58□□□□□ -0.24
SFXN3-201ENST00000224807 SCAMP1O15126 338 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms