RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 OAZ3Q9UMX2 235 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 PRSS51A0A1B0GVH4 220 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 DAPL1A0PJW8 107 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 FAM172BPA6NC97 362 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 CSTBP04080 98 aaKnown RBP13.07□□□□□ -0.32
SIX4-201ENST00000216513 IFNA6P05013 189 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 H1F0P07305 194 aaKnown RBP13.07□□□□□ -0.32
SIX4-201ENST00000216513 STARP49675 285 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 NR1H2P55055 460 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 CBARPQ8N350 705 aaPredicted RBP13.07□□□□□ -0.32
SIX4-201ENST00000216513 TRMT10AQ8TBZ6 339 aaKnown RBP13.07□□□□□ -0.32
SIX4-201ENST00000216513 COX4I2Q96KJ9 171 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 ZNF347Q96SE7 839 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 GFRA3O60609 400 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 PRKD3O94806 890 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 RPL5P46777 297 aaKnown RBP13.06□□□□□ -0.32
SIX4-201ENST00000216513 EEF1A1P68104 462 aaKnown RBP13.06□□□□□ -0.32
SIX4-201ENST00000216513 NANOS1Q8WY41 292 aaKnown RBP13.06□□□□□ -0.32
SIX4-201ENST00000216513 PRPF19Q9UMS4 504 aaKnown RBP13.06□□□□□ -0.32
SIX4-201ENST00000216513 PRSS21Q9Y6M0 314 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 RGS10O43665 173 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 ALDOAP04075 364 aaKnown RBP13.06□□□□□ -0.32
SIX4-201ENST00000216513 GRPRP30550 384 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 MAP3K8P41279 467 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 SIRPAP78324 504 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 HTRA4P83105 476 aaPredicted RBP13.06□□□□□ -0.32
SIX4-201ENST00000216513 OR4C15Q8NGM1 316 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 TRIB3Q96RU7 358 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 ARHGAP33O14559 1287 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 YY2O15391 372 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 ITGA5P08648 1049 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 PABPC4LP0CB38 370 aaKnown RBP13.06□□□□□ -0.32
SIX4-201ENST00000216513 MEX3DQ86XN8 651 aaKnown RBP13.06□□□□□ -0.32
SIX4-201ENST00000216513 FOXRED2Q8IWF2 684 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 PRDM6Q9NQX0 595 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 YARS2Q9Y2Z4 477 aaKnown RBP13.06□□□□□ -0.32
SIX4-201ENST00000216513 SSC5DA1L4H1 1573 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 ANXA2P2A6NMY6 339 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 CHST10O43529 356 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 PGRP06401 933 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 SPARCP09486 303 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 ZNF252P-AS1Q0IIN9 211 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 MLC1Q15049 377 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 ZNF630Q2M218 657 aaPredicted RBP13.06□□□□□ -0.32
SIX4-201ENST00000216513 TMEM196Q5HYL7 178 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 LSMEM2Q8N112 164 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 PNLDC1Q8NA58 520 aaKnown RBP13.06□□□□□ -0.32
SIX4-201ENST00000216513 CD180Q99467 661 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 MKRN2Q9H000 416 aaKnown RBP13.06□□□□□ -0.32
SIX4-201ENST00000216513 H0YGG7 62 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 RCBTB2O95199 551 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 DRD2P14416 443 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 GGT2P36268 569 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 SSR4P51571 173 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 ARF3P61204 181 aaPredicted RBP13.06□□□□□ -0.32
SIX4-201ENST00000216513 ZFPM2Q8WW38 1151 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 SORBS1Q9BX66 1292 aaKnown RBP13.06□□□□□ -0.32
SIX4-201ENST00000216513 SMPD3Q9NY59 655 aaPredicted RBP13.06□□□□□ -0.32
SIX4-201ENST00000216513 GPRC5BQ9NZH0 403 aa13.06□□□□□ -0.32
SIX4-201ENST00000216513 POM121BA6NF01 834 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 A8MV72 311 aaPredicted RBP13.05□□□□□ -0.32
SIX4-201ENST00000216513 UGT2B11O75310 529 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 PRDX3P30048 256 aaKnown RBP13.05□□□□□ -0.32
SIX4-201ENST00000216513 RPS6KA3P51812 740 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 DLG1Q12959 904 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 C9orf135Q5VTT2 229 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 SPRYD4Q8WW59 207 aaPredicted RBP13.05□□□□□ -0.32
SIX4-201ENST00000216513 OR1E3Q8WZA6 343 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 SMURF2Q9HAU4 748 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 LUZP4Q9P127 313 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 TBC1D24Q9ULP9 559 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 DCDC2BA2VCK2 349 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 HCKP08631 526 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 PPP2CBP62714 309 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 PPP2CAP67775 309 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 CRTC2Q53ET0 693 aaPredicted RBP13.05□□□□□ -0.32
SIX4-201ENST00000216513 OPN5Q6U736 354 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 KBTBD8Q8NFY9 601 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 DNAJB8Q8NHS0 232 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 GEMIN6Q8WXD5 167 aaKnown RBP13.05□□□□□ -0.32
SIX4-201ENST00000216513 PKP2Q99959 881 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 IFT52Q9Y366 437 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 GPLD1P80108 840 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 SLC3A1Q07837 685 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 BNIP3Q12983 259 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 CBFBQ13951 182 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 SF3A2Q15428 464 aaKnown RBP13.05□□□□□ -0.32
SIX4-201ENST00000216513 TAZQ16635 292 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 OR1N1Q8NGS0 311 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 SLC39A13Q96H72 371 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 B3GNT4Q9C0J1 378 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 DSN1Q9H410 356 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 MKLN1Q9UL63 735 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 PCDHGB7Q9Y5F8 929 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 C1orf53Q5VUE5 145 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 SIRT6Q8N6T7 355 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 C1orf216Q8TAB5 229 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 MSLNLQ96KJ4 702 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 SLC12A9Q9BXP2 914 aa13.05□□□□□ -0.32
SIX4-201ENST00000216513 PARPBPQ9NWS1 579 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms