RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 NSUN3Q9H649 340 aaKnown RBP9.99□□□□□ -0.81
VCL-201ENST00000211998 METTL17Q9H7H0 456 aaPredicted RBP9.99□□□□□ -0.81
VCL-201ENST00000211998 IFT22Q9H7X7 185 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 ZDHHC3Q9NYG2 299 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 PPP4R1LQ9P1A2 415 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 PCYT1BQ9Y5K3 369 aaPredicted RBP9.99□□□□□ -0.81
VCL-201ENST00000211998 NFAT5O94916 1531 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 A0A0G2JN53 185 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 GNSP15586 552 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 RRAS2P62070 204 aaPredicted RBP9.99□□□□□ -0.81
VCL-201ENST00000211998 RAB41Q5JT25 222 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 ADGRF1Q5T601 910 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 OR7G3Q8NG95 312 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 OR2AJ1Q8NGZ0 328 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 SH3RF2Q8TEC5 729 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 SLC35B4Q969S0 331 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 ZNF382Q96SR6 550 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 SULT4A1Q9BR01 284 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 FN3KQ9H479 309 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 SUV39H2Q9H5I1 410 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 IL36AQ9UHA7 158 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 GSRP00390 522 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 IFNA1P01562 189 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 UCHL1P09936 223 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 TPT1P13693 172 aaKnown RBP9.99□□□□□ -0.81
VCL-201ENST00000211998 RPL17P18621 184 aaKnown RBP9.99□□□□□ -0.81
VCL-201ENST00000211998 SERPINF1P36955 418 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 RPS27AP62979 156 aaKnown RBP9.99□□□□□ -0.81
VCL-201ENST00000211998 UBA52P62987 128 aaKnown RBP9.99□□□□□ -0.81
VCL-201ENST00000211998 GRIK2Q13002 908 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 FAM189A2Q15884 450 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 SYPL2Q5VXT5 272 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 CNKSR3Q6P9H4 555 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 DCUN1D3Q8IWE4 304 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 DTWD1Q8N5C7 304 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 OR5T1Q8NG75 326 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 ZCCHC10Q8TBK6 192 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 MYLIPQ8WY64 445 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 RELTQ969Z4 430 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 SORT1Q99523 831 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 DPYSL5Q9BPU6 564 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 FBRSQ9HAH7 460 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 MAN2C1Q9NTJ4 1040 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 YIPF1Q9Y548 306 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 KCTD3Q9Y597 815 aa9.99□□□□□ -0.81
VCL-201ENST00000211998 TMEM150CB9EJG8 249 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 TAS2R50P59544 299 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 ARHGAP1Q07960 439 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 MGAT3Q09327 533 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 NFATC4Q14934 902 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 ALG10Q5BKT4 473 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 ZNF691Q5VV52 312 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 GLT8D1Q68CQ7 371 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 BRAT1Q6PJG6 821 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 GDPD4Q6W3E5 623 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 SHFQ7M4L6 423 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 NUP54Q7Z3B4 507 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 GALNT10Q86SR1 603 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 SIAH1Q8IUQ4 282 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 ENTHD1Q8IYW4 607 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 FANK1Q8TC84 345 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 NETO1Q8TDF5 533 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 NSMAFQ92636 917 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 NEDD4LQ96PU5 975 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 TWNKQ96RR1 684 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 OR2AG1Q9H205 316 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 WDR26Q9H7D7 661 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 TXNL4BQ9NX01 149 aaKnown RBP9.98□□□□□ -0.81
VCL-201ENST00000211998 TAS2R8Q9NYW2 309 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 LRFN1Q9P244 771 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 MYO5BQ9ULV0 1848 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 SCO1O75880 301 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 AGR2O95994 175 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 MT-ND4P03905 459 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 AMY2AP04746 511 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 JUNP05412 331 aaKnown RBP9.98□□□□□ -0.81
VCL-201ENST00000211998 CBR1P16152 277 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 MPIP34949 423 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 C1QTNF8P60827 252 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 SLC39A4Q6P5W5 647 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 NUDT13Q86X67 352 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 SLC22A15Q8IZD6 547 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 LILRA2Q8N149 483 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 OR4K1Q8NGD4 311 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 TMEM125Q96AQ2 219 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 GAL3ST4Q96RP7 486 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 HRH4Q9H3N8 390 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 C11orf49Q9H6J7 331 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 GPATCH2Q9NW75 528 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 SCML2Q9UQR0 700 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 DNAJC15Q9Y5T4 150 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 ANKRD26Q9UPS8 1709 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 NAP1L6A6NFF2 107 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 G3V2L1 256 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 SLC31A1O15431 190 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 CCR8P51685 355 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 PDX1P52945 283 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 ZNF791Q3KP31 576 aaPredicted RBP9.98□□□□□ -0.81
VCL-201ENST00000211998 PLAG1Q6DJT9 500 aa9.98□□□□□ -0.81
VCL-201ENST00000211998 SIGIRRQ6IA17 410 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms