RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ALPLP05186 524 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 MPC1LP0DKB6 136 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 DRD3P35462 400 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 HHEXQ03014 270 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 SLC3A1Q07837 685 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 COQ5Q5HYK3 327 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 PIP5KL1Q5T9C9 394 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 C1orf189Q5VU69 101 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 PLET1Q6UQ28 207 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 GPR135Q8IZ08 494 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 OR51G2Q8NGK0 314 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 OR5M3Q8NGP4 307 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 DNAJB8Q8NHS0 232 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 IPCEF1Q8WWN9 437 aaPredicted RBP11.44□□□□□ -0.58
CHPF2-201ENST00000035307 SH3YL1Q96HL8 342 aaPredicted RBP11.44□□□□□ -0.58
CHPF2-201ENST00000035307 NECAB3Q96P71 396 aaPredicted RBP11.44□□□□□ -0.58
CHPF2-201ENST00000035307 NLGN3Q9NZ94 848 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 CNIH4Q9P003 139 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 PPT2Q9UMR5 302 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 WDR45Q9Y484 360 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 MTCH2Q9Y6C9 303 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 C2orf92A0A1B0GVN3 265 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 OR2W5A6NFC9 320 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 SLC30A4O14863 429 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 SLC22A1O15245 554 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 IDH3BO43837 385 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 KHKP50053 298 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 ZNF404Q494X3 552 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 IDNKQ5T6J7 187 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 NDUFAF5Q5TEU4 345 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 C11orf88Q6PI97 169 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 DLEU7Q6UYE1 221 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 SPATC1Q76KD6 591 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 THAP3Q8WTV1 239 aaPredicted RBP11.44□□□□□ -0.58
CHPF2-201ENST00000035307 FSCN3Q9NQT6 498 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 SLC25A37Q9NYZ2 338 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 DOCK9Q9BZ29 2069 aa11.44□□□□□ -0.58
CHPF2-201ENST00000035307 FABP12A6NFH5 140 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 AHCYP23526 432 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 EPHA2P29317 976 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 SRSF5Q13243 272 aaKnown RBP11.43□□□□□ -0.58
CHPF2-201ENST00000035307 SPCS2Q15005 226 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 ZNF750Q32MQ0 723 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 C10orf62Q5T681 223 aaPredicted RBP11.43□□□□□ -0.58
CHPF2-201ENST00000035307 AGBL4Q5VU57 503 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 BCDIN3DQ7Z5W3 292 aaKnown RBP11.43□□□□□ -0.58
CHPF2-201ENST00000035307 SETD7Q8WTS6 366 aaKnown RBP11.43□□□□□ -0.58
CHPF2-201ENST00000035307 MGLLQ99685 303 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 OR51E2Q9H255 320 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 ZBTB20Q9HC78 741 aaPredicted RBP11.43□□□□□ -0.58
CHPF2-201ENST00000035307 SPHK1Q9NYA1 384 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 HCN3Q9P1Z3 774 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 ZNF222Q9UK12 451 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 XIRP2A4UGR9 3374 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 ARHGEF17Q96PE2 2063 aaPredicted RBP11.43□□□□□ -0.58
CHPF2-201ENST00000035307 KHNYNO15037 678 aaKnown RBP11.43□□□□□ -0.58
CHPF2-201ENST00000035307 B3GALT2O43825 422 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 IGFALSP35858 605 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 TIAL1Q01085 375 aaKnown RBP eCLIP11.43□□□□□ -0.58
CHPF2-201ENST00000035307 PHF19Q5T6S3 580 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 MLIPQ5VWP3 458 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 FCRLBQ6BAA4 426 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 ALG1LQ6GMV1 187 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 KLHL6Q8WZ60 621 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 ECHDC3Q96DC8 303 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 MCHR1Q99705 422 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 C8orf33Q9H7E9 229 aaPredicted RBP11.43□□□□□ -0.58
CHPF2-201ENST00000035307 TMEM27Q9HBJ8 222 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 BRD7Q9NPI1 651 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 SH2B3Q9UQQ2 575 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 MIA3Q5JRA6 1907 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 FAM86C2PA6NEL3 165 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 AREL1O15033 823 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 RPP14O95059 124 aaKnown RBP11.43□□□□□ -0.58
CHPF2-201ENST00000035307 CERS1P27544 350 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 RAB28P51157 221 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 EMX1Q04741 257 aaPredicted RBP11.43□□□□□ -0.58
CHPF2-201ENST00000035307 KRR1Q13601 381 aaKnown RBP11.43□□□□□ -0.58
CHPF2-201ENST00000035307 QPRTQ15274 297 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 SYPL1Q16563 259 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 MOGQ16653 247 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 CDKN3Q16667 212 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 NKAIN2Q5VXU1 208 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 CYHR1Q6ZMK1 362 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 TECPR1Q7Z6L1 1165 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 PHF7Q9BWX1 381 aaPredicted RBP11.43□□□□□ -0.58
CHPF2-201ENST00000035307 OSBPL10Q9BXB5 764 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 GSDMCQ9BYG8 508 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 SPNS1Q9H2V7 528 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 SACM1LQ9NTJ5 587 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 MARK1Q9P0L2 795 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 DKK3Q9UBP4 350 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 ACSL5Q9ULC5 683 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 C5orf67F2Z3F1 127 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 PRKNO60260 465 aaPredicted RBP11.43□□□□□ -0.58
CHPF2-201ENST00000035307 TGFBR1P36897 503 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 CDH11P55287 796 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 ITGA1P56199 1179 aa11.43□□□□□ -0.58
CHPF2-201ENST00000035307 SOWAHCQ53LP3 525 aaPredicted RBP11.43□□□□□ -0.58
CHPF2-201ENST00000035307 MARCH9Q86YJ5 346 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms