RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 NPRL3Q12980 569 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 PLEKHS1Q5SXH7 462 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 KIAA1161Q6NSJ0 714 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 C17orf107Q6ZR85 190 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 MSANTD1Q6ZTZ1 278 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 ADGRG2Q8IZP9 1017 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 APCDD1Q8J025 514 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 NETO1Q8TDF5 533 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 RBPMSQ93062 196 aaKnown RBP11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 SLC35G5Q96KT7 338 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 YIPF4Q9BSR8 244 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 TMEM30AQ9NV96 361 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 B3GNT2Q9NY97 397 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 GPR83Q9NYM4 423 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 FRMPD3Q5JV73 1810 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 MROH6A6NGR9 719 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 HHLA1C9JL84 531 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 ALDOBP05062 364 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 PPP3R1P63098 170 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 MEF2AQ02078 507 aaPredicted RBP11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 ZNF763Q0D2J5 394 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 TAF13Q15543 124 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 KLHL22Q53GT1 634 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 NHSL2Q5HYW2 709 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 TOR2AQ5JU69 321 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 OTUD1Q5VV17 481 aaPredicted RBP11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 CES4AQ5XG92 561 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 ARL9Q6T311 187 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 CREB3L2Q70SY1 520 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 RTN4RL1Q86UN2 441 aaPredicted RBP11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 SLC7A6Q92536 515 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 GPR78Q96P69 363 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 UFSP2Q9NUQ7 469 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 TMPRSS11EQ9UL52 423 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 KRBOX1C9JBD0 128 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 TLR4O00206 839 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 SLC22A5O76082 557 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 FGF19O95750 216 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 SOD2P04179 222 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 H1F0P07305 194 aaKnown RBP11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 TYRP14679 529 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 CELP19835 753 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 ZNF140P52738 457 aaPredicted RBP11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 PRR5P85299 388 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 TMEM115Q12893 351 aaPredicted RBP11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 GPM6BQ13491 265 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 SPHARQ15513 63 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 ZNHIT3Q15649 155 aaPredicted RBP11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 HSF5Q4G112 596 aaPredicted RBP11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 SPNS2Q8IVW8 549 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 ESX1Q8N693 406 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 POGLUT1Q8NBL1 392 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 CHDHQ8NE62 594 aaPredicted RBP11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 ATP6V1C2Q8NEY4 427 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 FBXL3Q9UKT7 428 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 A0A075B6Q4 140 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 C2orf92A0A1B0GVN3 265 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 FAM86C2PA6NEL3 165 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 CACNB4O00305 520 aaPredicted RBP11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 MUSKO15146 869 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 CBR1P16152 277 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 PSMA3P25788 255 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 PDHA2P29803 388 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 RBM34P42696 430 aaKnown RBP11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 CRISP3P54108 245 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 ARF3P61204 181 aaPredicted RBP11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 ARF1P84077 181 aaKnown RBP11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 SP140Q13342 867 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 DOC2AQ14183 400 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 ZNF630Q2M218 657 aaPredicted RBP11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 LY6G5CQ5SRR4 150 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 LIPJQ5W064 366 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 KLHL24Q6TFL4 600 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 RNF130Q86XS8 419 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 TMEM185AQ8NFB2 350 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 BEST4Q8NFU0 473 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 TCEAL7Q9BRU2 100 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 OR2S2Q9NQN1 319 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 TDP1Q9NUW8 608 aa11.57□□□□□ -0.56
TSPAN9-201ENST00000011898 FABP7O15540 132 aa11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 TSPAN6O43657 245 aa11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 NFATC1O95644 943 aa11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 NUDT14O95848 222 aa11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 SHMT2P34897 504 aa11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 EIF2S3P41091 472 aaKnown RBP11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 ERVK-21P61565 698 aa11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 ALKAL2Q6UX46 152 aa11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 CEP68Q76N32 757 aa11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 CLECL1Q8IZS7 167 aa11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 BCL7CQ8WUZ0 217 aaPredicted RBP11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 LINC01599Q8WXQ3 324 aa11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 TFGQ92734 400 aaPredicted RBP11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 RHBDF1Q96CC6 855 aa11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 HSPA12BQ96MM6 686 aa11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 HDHD5Q9BXW7 423 aa11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 TRPV4Q9HBA0 871 aa11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 REV1Q9UBZ9 1251 aa11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 USP22Q9UPT9 525 aa11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 FARSAQ9Y285 508 aaKnown RBP11.56□□□□□ -0.56
TSPAN9-201ENST00000011898 OR10H1Q9Y4A9 318 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms