RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 GRIK5Q16478 980 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 TIGD5Q53EQ6 642 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 ARSJQ5FYB0 599 aaPredicted RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 FAM74A1Q5RGS3 127 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 BCL2L15Q5TBC7 163 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 GK5Q6ZS86 529 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 TRAPPC12Q8WVT3 735 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 THAP4Q8WY91 577 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 TANKQ92844 425 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 TNFRSF25Q93038 417 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 RADILQ96JH8 1075 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 SLC25A21Q9BQT8 299 aaPredicted RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 OR52A5Q9H2C5 316 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 ABCB9Q9NP78 766 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 UPK3BL1B0FP48 263 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 UPK3BL2E5RIL1 263 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 GABBR2O75899 941 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 BMP2P12643 396 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 MTNR1AP48039 350 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 AFF3P51826 1226 aaKnown RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 LY6KQ17RY6 165 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 MPEG1Q2M385 716 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 UBE2NLQ5JXB2 153 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 OR56B4Q8NH76 319 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 JPH3Q8WXH2 748 aaPredicted RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 UBL7Q96S82 380 aaPredicted RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 DPYSL5Q9BPU6 564 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 SLC19A3Q9BZV2 496 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 HSPB2A8KAH6 182 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 DVL1O14640 695 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 TBX10O75333 385 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 CD48P09326 243 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 KITLGP21583 273 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 CD9P21926 228 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 DVL1P1P54792 670 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 HSPB2Q16082 182 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 LINGO4Q6UY18 593 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 USP51Q70EK9 711 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 OR4F6Q8NGB9 312 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 HERPUD2Q9BSE4 406 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 REEP4Q9H6H4 257 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF286AQ9HBT8 521 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 TMPRSS4Q9NRS4 437 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 NRP1O14786 923 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 EPHX1P07099 455 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 ALAS2P22557 587 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 RPS5P46782 204 aaKnown RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 TAF10Q12962 218 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF266Q14584 549 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 MYLK3Q32MK0 819 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 TRIM46Q7Z4K8 759 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 MECRQ9BV79 373 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 DPEP3Q9H4B8 488 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 EBF3Q9H4W6 596 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF446Q9NWS9 450 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 BACE2Q9Y5Z0 518 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 TRBC2A0A5B9 178 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 RFPL2O75678 378 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 HSPA7P48741 367 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 CASP9P55211 416 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 CNTN4Q8IWV2 1026 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 KIAA0319LQ8IZA0 1049 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 LRRC25Q8N386 305 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 NKAIN3Q8N8D7 197 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 NAT8LQ8N9F0 302 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 SYT14Q8NB59 555 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 LRTOMTQ8WZ04 291 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 TAAR8Q969N4 342 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 MTERF1Q99551 399 aaKnown RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 TSPAN10Q9H1Z9 355 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 ABCG5Q9H222 651 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 RHBGQ9H310 441 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 SEMA6CQ9H3T2 930 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 C2orf42Q9NWW7 574 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 CYB5R1Q9UHQ9 305 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 ADAMTS4O75173 837 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 C4BPAP04003 597 aaKnown RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 TK1P04183 234 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 ICAM2P13598 275 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 PGCP20142 388 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 PAFAH1B3Q15102 231 aaKnown RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 SPHARQ15513 63 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 NADK2Q4G0N4 442 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 ESCO2Q56NI9 601 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 OR52E8Q6IFG1 317 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 CCSAPQ6IQ19 270 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 IQCHQ86VS3 1027 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 OR6C4Q8NGE1 309 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 OR5H2Q8NGV7 314 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 FAM46BQ96A09 425 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 NECTIN4Q96NY8 510 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 OR2M2Q96R28 347 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 MYADMQ96S97 322 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 GATA5Q9BWX5 397 aaPredicted RBP5.82□□□□□ -1.48
VPS13D-201ENST00000011700 TMEM59LQ9UK28 342 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 CHATP28329 748 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 OR1D2P34982 312 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 DMWDQ09019 674 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 FUT10Q6P4F1 479 aa5.82□□□□□ -1.48
VPS13D-201ENST00000011700 FOXR1Q6PIV2 292 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms