RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 FukQ7TMC8 1090 aa15.03■□□□□ -0
Trim39-203ENSMUST00000113706 HhipQ7TN16 700 aa15.03■□□□□ -0
Trim39-203ENSMUST00000113706 Sdhaf3Q8BQU3 125 aa15.03■□□□□ -0
Trim39-203ENSMUST00000113706 Tmem106aQ8VC04 261 aa15.03■□□□□ -0
Trim39-203ENSMUST00000113706 Sugt1Q9CX34 336 aa15.03■□□□□ -0
Trim39-203ENSMUST00000113706 Twist2Q9D030 160 aa15.03■□□□□ -0
Trim39-203ENSMUST00000113706 CalyQ9DCA7 226 aa15.03■□□□□ -0
Trim39-203ENSMUST00000113706 Mrpl40Q9Z2Q5 206 aa15.03■□□□□ -0
Trim39-203ENSMUST00000113706 Gm10406A6NAS4 205 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 Gm3373A6NAS7 205 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 Gm3298E9PW80 205 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 Gm3667K7N757 205 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 Hsd17b10O08756 261 aaKnown RBP15.02■□□□□ -0
Trim39-203ENSMUST00000113706 Akap3O88987 864 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 Defb43Q30KM9 69 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 Nkx6-3Q3UHX8 262 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 Gm3558Q5FWC9 205 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 C2cd4cC2CD4Q5HZI2 419 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 Rbbp4Q60972 425 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 Cdk6Q64261 326 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 Olfr169Q7TS53 313 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 McatQ8R3F5 381 aaKnown RBP15.02■□□□□ -0
Trim39-203ENSMUST00000113706 SelenomQ8VHC3 145 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 Pcdhgb2Q91XX7 928 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 Fam118aQ91YN1 357 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 Mrm1Q99J25 320 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 St7Q99M96 577 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 Use1Q9CQ56 270 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 Myg1Q9JK81 380 aa15.02■□□□□ -0
Trim39-203ENSMUST00000113706 Gm37596A0A0A6YXL2 336 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Gm13040A2A8C4 496 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Gm8765B7ZWJ3 1017 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 GfapP03995 430 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Tyrp1P07147 537 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Tra2bP62996 288 aaKnown RBP15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 SnrpnP63163 240 aaKnown RBP15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Pou1f1Q00286 291 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Emx1Q04742 257 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Pros1Q08761 675 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Gm906Q3V0M1 1017 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Zfand1Q8BFR6 268 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Prdx6bQ8BG37 224 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Creg2Q8BGC9 288 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Atg4bQ8BGE6 393 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Abhd18Q8C1A9 464 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Mfsd6Q8CBH5 775 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 SynpoQ8CC35 929 aaKnown RBP15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 HopxQ8R1H0 73 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Far1Q922J9 515 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 PglsQ9CQ60 257 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Erp27Q9D8U3 272 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Phc2Q9QWH1 850 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Greb1Q3UHK3 1954 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Wsb2O54929 404 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Mc3rP33033 323 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Atp5a1Q03265 553 aaKnown RBP15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Tmem217Q14AF1 189 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 RogdiQ3TDK6 287 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Dhrs11Q3U0B3 260 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Pdap1Q3UHX2 181 aaKnown RBP15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Xrcc1Q60596 631 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Olfr1308Q7TQX0 320 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Mfn1Q811U4 741 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Gpr171Q8BG55 319 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 4933430I17RikQ8BHW4 495 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Peli2Q8BST6 419 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Serpina11Q8CIE0 424 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Cnot3Q8K0V4 751 aaKnown RBP15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Olfr586Q8VH13 317 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Olfr103Q920Y8 313 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 MrgprhQ99MT8 321 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Rhox2aQ9D4Y3 191 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Lypd2Q9DD23 127 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Jph3Q9ET77 744 aa15.02□□□□□ -0.01
Trim39-203ENSMUST00000113706 Lrp4Q8VI56 1905 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Gm609E9Q573 300 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Tulp3O88413 460 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Hcn1O88704 910 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Gsta2P10648 222 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Polr2cP97760 275 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Zfp39Q02525 718 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 MedagQ14BA6 303 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Fcho2Q3UQN2 809 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Prkd1Q62101 918 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Igsf5Q7TSN7 370 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Mrps35Q8BJZ4 320 aaKnown RBP15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 BniplQ99JU7 328 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Metap1dQ9CPW9 335 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 TrirQ9D735 173 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Rad18Q9QXK2 509 aaKnown RBP15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Atg2bQ80XK6 2075 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 BC034090A0A087WP46 1202 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Spats1A2RRY8 269 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Vmn2r91E9Q2U5 856 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Il20rbE9Q9A6 308 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Gm10479K7N6H4 105 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Man2b2O54782 1018 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 P01629 112 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Gpat2Q14DK4 801 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Chsy3Q5DTK1 884 aa15.01□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms