RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Plpp3Q99JY8 312 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slamf9Q9D780 285 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Btbd35f21A0A140T8Q5 498 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm21560D3Z7A4 205 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Btbd35f22J3QN64 498 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm3138K7N754 218 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Galr2O88854 371 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Q3U7U4 132 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Ugt2b36Q3UEP4 530 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Pin1rt1Q3ULQ2 159 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Prtn3Q61096 254 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm5662Q8BX20 144 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Arl5bQ9D4P0 179 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Phf11bB4XVQ1 276 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cd48P18181 240 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Uba1Q02053 1058 aaKnown RBP9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Pcdhga7Q6DD96 935 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Rsl1Q7M6Y1 485 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1161Q7TR29 321 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Mal2Q8BI08 175 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tmem125Q8CHQ6 216 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cml2Q8CHQ9 238 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 NrarpQ91ZA8 114 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cadm3Q99N28 396 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Dcdc2cQ9D1B8 347 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Q9D5Y0 588 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Znhit2Q9QY66 399 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 H2afb1S4R1E0 115 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 H2afb3S4R1G7 115 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Myh1Q5SX40 1942 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Hdac3O88895 424 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tcte3P11985 191 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slc6a13P31649 602 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Elmod2Q8BGF6 293 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 BC024139Q8BVJ3 772 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Bclaf1Q8K019 919 aaKnown RBP9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Vmn1r69Q8VIC1 319 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Ces2cQ91WG0 561 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Lap3Q9CPY7 519 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Fbxw5Q9QXW2 573 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm45713A0A1B0GS68 446 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tmem201A2A8U2 664 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm2056J3QQ02 144 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Socs5O54928 536 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Mthfd2P18155 350 aaKnown RBP9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Dlx5P70396 289 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 PfplQ5RKV8 702 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 MafkQ61827 156 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gpr119Q7TQP3 335 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cables2Q8K3M5 476 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Rhox2aQ9D4Y3 191 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Pfdn5Q9WU28 154 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Atxn7l3A2AWT3 347 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Zfp141G3UY09 685 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm3336J3QMQ6 198 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Sap18O55128 153 aaKnown RBP9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Etv4P28322 485 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Rap2bP61226 183 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr885Q7TRE0 309 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Emc1Q8C7X2 997 aaKnown RBP9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Hbp1Q8R316 516 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cuedc1Q8R3V6 388 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Rab40bQ8VHP8 278 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Nmnat1Q9EPA7 285 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 RbmxQ9WV02 391 aaKnown RBP9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 A0A1L1SV24 88 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm10721J3QPJ9 223 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Rps24P62849 133 aaKnown RBP9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Htr1aQ64264 421 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 AntxrlQ8BVM2 641 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr729Q8VET4 323 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 CrygnQ8VHL5 183 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Acss1Q99NB1 682 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cep41Q99NF3 373 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 MtapQ9CQ65 283 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Zfp68Q9Z116 606 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Actl10A2AKE7 346 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr723E9PZU2 309 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr724K7N5X7 309 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Csn1s2aQ02862 184 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Sox11Q7M6Y2 395 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Kctd9Q80UN1 339 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cep68Q8C0D9 733 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Neto1Q8R4I7 533 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gdpd1Q9CRY7 314 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Bcl9Q9D219 1425 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tet3Q8BG87 1668 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm13178B1AVU7 408 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Scgb2b3D2XZ38 112 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 C6E9Q6D8 931 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Sppl2bQ3TD49 578 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1051Q7TR76 308 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Fbxl4Q8BH70 621 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Ak6Q8VCP8 172 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 NpntQ91V88 561 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cts3Q91ZD5 332 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Ankrd7Q9D504 279 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Dgat2Q9DCV3 388 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slco1a1Q9QXZ6 670 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Myh3P13541 1940 aa9.72□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms