RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Slc6a2O55192 617 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 P01631 113 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Csf2rbP26955 896 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 CntfP51642 198 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 ErgP81270 486 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Tmem64Q3U145 381 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Slc25a51Q5HZI9 298 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Tmem199Q5SYH2 208 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 OclnQ61146 521 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Pan3Q640Q5 837 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Fam167aQ6P1G6 215 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Tm7sf2Q71KT5 418 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 CtsoQ8BM88 312 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Tmem200aQ8C817 491 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Mettl22Q8R1C6 393 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Impa2Q91UZ5 290 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Grip1Q925T6 1127 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Rhox13F6YCR7 232 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Dcpp3L7N259 170 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 RngttO55236 597 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 FurinP23188 793 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Fkbp14P59024 211 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Rnf180Q3U827 592 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Rassf5Q5EBH1 413 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Pon2Q62086 354 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Gpr158Q8C419 1200 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Slc31a1Q8K211 196 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Col25a1Q99MQ5 666 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 LhppQ9D7I5 270 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Kcne2Q9D808 123 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Nt5c1aA3KFX0 365 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Fam46aD3Z5S8 447 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Zfp169E9Q3R6 731 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Vmn1r58G3X9U3 310 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Gm17026K7N6Z0 213 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 TertO70372 1122 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Polr1cP52432 346 aaKnown RBP15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Eml4Q3UMY5 988 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Zik1Q80YP6 463 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Camk1gQ91VB2 477 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Uckl1Q91YL3 548 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cd209dQ91ZW8 237 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Use1Q9CQ56 270 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Glipr1l1Q9DAG6 236 aa15.43■□□□□ 0.06
Trim28-201ENSMUST00000005705 Plin4O88492 1403 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Zfp934K7N6H3 473 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 VegfbP49766 207 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Pde12Q3TIU4 608 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Slc30a10Q3UVU3 470 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 ToxQ66JW3 526 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 ZfatQ7TS63 1237 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Dtd2Q8BHA3 168 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 BC024139Q8BVJ3 772 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cox10Q8CFY5 443 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Q8K039 155 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Polr1eQ8K202 482 aaKnown RBP15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Wfikkn1Q8R0S6 552 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Mospd2Q9CWP6 518 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Lrrc69Q9D9Q0 347 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 FancgQ9EQR6 623 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Tlr4Q9QUK6 835 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Col24a1Q30D77 1733 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Bdp1Q571C7 2467 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Igkv5-39A0A0G2JDV4 115 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Gm3149E9PW52 257 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Tsga10ipF7A1F0 157 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Gm8362K7N6Y6 257 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Gm136Q3V037 328 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Gdi2Q61598 445 aaKnown RBP15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Awat2Q6E1M8 333 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cxcl3Q6W5C0 100 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Tas2r13Q7M720 305 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Ube2q1Q7TSS2 422 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Dlgap5Q8K4R9 808 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Olfr815Q8VFU0 316 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Olfr170Q8VGL6 313 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Pskh1Q91YA2 424 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Scamp4Q9JKV5 230 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Dpp6Q9Z218 804 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 AtmQ62388 3066 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cacna1bO55017 2327 aa15.42■□□□□ 0.06
Trim28-201ENSMUST00000005705 Obsl1D3YYU8 1804 aaKnown RBP15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cd300ld4A2A7W1 245 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cdk10Q3UMM4 360 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Crhr2Q60748 411 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cdk6Q64261 326 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cd300ld3Q6SJQ5 245 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Olfr1322Q7TQW3 310 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Mtrf1Q8K126 446 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Olfr450Q8VF81 310 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Trim13Q9CYB0 407 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 MsraQ9D6Y7 233 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Dkk3Q9QUN9 349 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Ybx2Q9Z2C8 360 aaKnown RBP15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Vmn2r115E9Q0E7 857 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Sypl1O09117 261 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Pbx2O35984 430 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cyp4a10O88833 509 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Gm853Q3UNZ2 425 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Kbtbd8Q3UQV5 599 aa15.41■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms