RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	CXCL14	O95715	111 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	OR12D1	P0DN82	309 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	MMP11	P24347	488 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	GPR1	P46091	355 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	C22orf42	Q6IC83	251 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	USP30	Q70CQ3	517 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	UBE2Q1	Q7Z7E8	422 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	C11orf96	Q7Z7L8	435 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	LSR	Q86X29	649 aa	Predicted RBP	13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	NRSN1	Q8IZ57	195 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	OR52I1	Q8NGK6	324 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	OR9Q1	Q8NGQ5	310 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	DEFB118	Q96PH6	123 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	KCNK12	Q9HB15	430 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	TEX10	Q9NXF1	929 aa	Predicted RBP	13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	NPAP1	Q9NZP6	1156 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	SEC14L3	Q9UDX4	400 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	TAC3	Q9UHF0	121 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	ACAD8	Q9UKU7	415 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	CKAP5	Q14008	2032 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021		A0A0G2JN53	185 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	SLC35F4	A4IF30	521 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	IDH3B	O43837	385 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	PSMB5	P28074	263 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	RACK1	P63244	317 aa	Known RBP	13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	NTHL1	P78549	312 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	MLLT11	Q13015	90 aa	Predicted RBP	13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	TRIM60	Q495X7	471 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	SPDYE7P	Q495Y7	208 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	GLYR1	Q49A26	553 aa	Predicted RBP	13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	SYT14P1	Q58G82	188 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	OR2G6	Q5TZ20	316 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	SETD7	Q8WTS6	366 aa	Known RBP	13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	XAGE5	Q8WWM1	108 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	SMPDL3A	Q92484	453 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	TM9SF4	Q92544	642 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	DDX28	Q9NUL7	540 aa	Known RBP	13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	PLEKHB1	Q9UF11	243 aa	Predicted RBP	13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	HCN2	Q9UL51	889 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	SSR3	Q9UNL2	185 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	SLC28A2	O43868	658 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	EPPIN	O95925	133 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	GSTM5	P46439	218 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	GINS1	Q14691	196 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	OCLN	Q16625	522 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	ATAT1	Q5SQI0	421 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	CCDC149	Q6ZUS6	474 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	UBE2J2	Q8N2K1	259 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	SYT14	Q8NB59	555 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	SETD6	Q8TBK2	473 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	CREB3L4	Q8TEY5	395 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	UBE2E3	Q969T4	207 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	SLC25A46	Q96AG3	418 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	LRR1	Q96L50	414 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	WDFY2	Q96P53	400 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	PRR14	Q9BWN1	585 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	OR52A5	Q9H2C5	316 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	MAN2C1	Q9NTJ4	1040 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	CHD7	Q9P2D1	2997 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	SLC23A2	Q9UGH3	650 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	TES	Q9UGI8	421 aa	Known RBP	13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	TMA7	Q9Y2S6	64 aa	Known RBP	13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	CMAHP	Q9Y471	501 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021		A0A1W2PQL4	384 aa	Predicted RBP	13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	MEIOC	A2RUB1	952 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021		H7BY64	318 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	MYL12B	O14950	172 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	NME6	O75414	186 aa	Predicted RBP	13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	GIPR	P48546	466 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	CCT3	P49368	545 aa	Known RBP	13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	GAS1	P54826	345 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	DAB2	P98082	770 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	RUNX1T1	Q06455	604 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	HYAL2	Q12891	473 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	HNRNPA0	Q13151	305 aa	Known RBP	13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	SZRD1	Q7Z422	152 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	RAB43	Q86YS6	212 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	KRT78	Q8N1N4	520 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	SLAIN1	Q8ND83	568 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	FGF11	Q92914	225 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	PRAP1	Q96NZ9	151 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	MS4A8	Q9BY19	250 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	PLA2G12A	Q9BZM1	189 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	NDEL1	Q9GZM8	345 aa		13.08	□□□□□ -0.32
PHGDH-233	ENST00000642021	IQCM	A0A1B0GVH7	501 aa		13.07	□□□□□ -0.32
PHGDH-233	ENST00000642021	NTN1	O95631	604 aa		13.07	□□□□□ -0.32
PHGDH-233	ENST00000642021	EPHX1	P07099	455 aa		13.07	□□□□□ -0.32
PHGDH-233	ENST00000642021	SSTR4	P31391	388 aa		13.07	□□□□□ -0.32
PHGDH-233	ENST00000642021	NOG	Q13253	232 aa		13.07	□□□□□ -0.32
PHGDH-233	ENST00000642021	COL9A2	Q14055	689 aa	Predicted RBP	13.07	□□□□□ -0.32
PHGDH-233	ENST00000642021	ZNF77	Q15935	545 aa		13.07	□□□□□ -0.32
PHGDH-233	ENST00000642021	LCTL	Q6UWM7	567 aa		13.07	□□□□□ -0.32
PHGDH-233	ENST00000642021	FAM131A	Q6UXB0	335 aa		13.07	□□□□□ -0.32
PHGDH-233	ENST00000642021	ANKRD33	Q7Z3H0	272 aa		13.07	□□□□□ -0.32
PHGDH-233	ENST00000642021	C12orf40	Q86WS4	652 aa		13.07	□□□□□ -0.32
PHGDH-233	ENST00000642021	FAM26E	Q8N5C1	309 aa		13.07	□□□□□ -0.32
PHGDH-233	ENST00000642021	TBC1D19	Q8N5T2	526 aa		13.07	□□□□□ -0.32
PHGDH-233	ENST00000642021	OR2L2	Q8NH16	312 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms