RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 RNF111Q6ZNA4 994 aa13.46□□□□□ -0.25
SRRT-219ENST00000641476 SLC29A4Q7RTT9 530 aa13.46□□□□□ -0.25
SRRT-219ENST00000641476 RELL1Q8IUW5 271 aa13.46□□□□□ -0.25
SRRT-219ENST00000641476 DMRTC2Q8IXT2 367 aaPredicted RBP13.46□□□□□ -0.25
SRRT-219ENST00000641476 FBXW8Q8N3Y1 598 aa13.46□□□□□ -0.25
SRRT-219ENST00000641476 OR5M9Q8NGP3 310 aa13.46□□□□□ -0.25
SRRT-219ENST00000641476 PAQR8Q8TEZ7 354 aa13.46□□□□□ -0.25
SRRT-219ENST00000641476 RND1Q92730 232 aa13.46□□□□□ -0.25
SRRT-219ENST00000641476 PHF21BQ96EK2 531 aa13.46□□□□□ -0.25
SRRT-219ENST00000641476 NSUN5Q96P11 429 aaKnown RBP13.46□□□□□ -0.25
SRRT-219ENST00000641476 PAFAH2Q99487 392 aa13.46□□□□□ -0.25
SRRT-219ENST00000641476 WWTR1Q9GZV5 400 aa13.46□□□□□ -0.25
SRRT-219ENST00000641476 NOL11Q9H8H0 719 aaKnown RBP13.46□□□□□ -0.25
SRRT-219ENST00000641476 WDR41Q9HAD4 459 aa13.46□□□□□ -0.25
SRRT-219ENST00000641476 SEMA4BQ9NPR2 832 aaPredicted RBP13.46□□□□□ -0.25
SRRT-219ENST00000641476 TEX10Q9NXF1 929 aaPredicted RBP13.46□□□□□ -0.25
SRRT-219ENST00000641476 PCTPQ9UKL6 214 aa13.46□□□□□ -0.25
SRRT-219ENST00000641476 IQANK1A0A1B0GTG1 560 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 A0A1B0GVC2 190 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 ATP6AP2A0A1C7CYW4 349 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 A0A1W2PS29 197 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 LRRC3CA6NJW4 275 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 WASHC1A8K0Z3 465 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 STX16-NPEPL1H3BU86 382 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 AQP7O14520 342 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 STX16O14662 325 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 BCKDKO14874 412 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 ATP6AP2O75787 350 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 GBAP04062 536 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 FBXO45P0C2W1 286 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 ENDOUP21128 410 aaKnown RBP13.45□□□□□ -0.26
SRRT-219ENST00000641476 ACVR2AP27037 513 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 CCNG1P51959 295 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 SLC37A1P57057 533 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 ZNF267Q14586 743 aaPredicted RBP13.45□□□□□ -0.26
SRRT-219ENST00000641476 TAOK1Q7L7X3 1001 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 CCDC71Q8IV32 467 aaPredicted RBP13.45□□□□□ -0.26
SRRT-219ENST00000641476 DND1Q8IYX4 353 aaKnown RBP13.45□□□□□ -0.26
SRRT-219ENST00000641476 SLC15A4Q8N697 577 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 FAM13CQ8NE31 585 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 OR10G3Q8NGC4 313 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 RIT1Q92963 219 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 NINJ1Q92982 152 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 FMO2Q99518 471 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 SERPINI1Q99574 410 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 KCNJ16Q9NPI9 418 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 RRAGDQ9NQL2 400 aaPredicted RBP13.45□□□□□ -0.26
SRRT-219ENST00000641476 DLL4Q9NR61 685 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 KCNN3Q9UGI6 736 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 FAM215AQ9Y5M1 114 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 CHCHD2Q9Y6H1 151 aaPredicted RBP13.45□□□□□ -0.26
SRRT-219ENST00000641476 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.45□□□□□ -0.26
SRRT-219ENST00000641476 ACANP16112 2415 aa13.45□□□□□ -0.26
SRRT-219ENST00000641476 PRRC2AP48634 2157 aaKnown RBP13.45□□□□□ -0.26
SRRT-219ENST00000641476 INTS1Q8N201 2190 aaKnown RBP13.44□□□□□ -0.26
SRRT-219ENST00000641476 MAP1AP78559 2803 aaPredicted RBP13.44□□□□□ -0.26
SRRT-219ENST00000641476 OR6C76A6NM76 312 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 TOXO94900 526 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 LRATO95237 230 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 RPS17P08708 135 aaKnown RBP13.44□□□□□ -0.26
SRRT-219ENST00000641476 RBP1P09455 135 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 ECHS1P30084 290 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 SSTR4P31391 388 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 MAN2A2P49641 1150 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 KCNJ2P63252 427 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 PMPCAQ10713 525 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 TSNAXIP1Q2TAA8 658 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 GGTA1PQ4G0N0 100 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 GXYLT1Q4G148 440 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 SLC22A10Q63ZE4 541 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 FRG2Q64ET8 278 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 ZNF585AQ6P3V2 769 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 ACAD11Q709F0 780 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 Q71RC1 249 aaPredicted RBP13.44□□□□□ -0.26
SRRT-219ENST00000641476 LILRB4Q8NHJ6 448 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 UCN3Q969E3 161 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 ATP6V1E2Q96A05 226 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 FRG2BQ96QU4 278 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 ZBTB26Q9HCK0 441 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 DNAJB12Q9NXW2 375 aaKnown RBP13.44□□□□□ -0.26
SRRT-219ENST00000641476 PSD3Q9NYI0 1048 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 SPRR3Q9UBC9 169 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 DMGDHQ9UI17 866 aaKnown RBP13.44□□□□□ -0.26
SRRT-219ENST00000641476 TMCO1Q9UM00 188 aa13.44□□□□□ -0.26
SRRT-219ENST00000641476 BOKQ9UMX3 212 aaPredicted RBP13.44□□□□□ -0.26
SRRT-219ENST00000641476 RPH3AQ9Y2J0 694 aaPredicted RBP13.44□□□□□ -0.26
SRRT-219ENST00000641476 SUSD5O60279 629 aa13.43□□□□□ -0.26
SRRT-219ENST00000641476 SMIM24O75264 130 aa13.43□□□□□ -0.26
SRRT-219ENST00000641476 HOXD4P09016 255 aaPredicted RBP13.43□□□□□ -0.26
SRRT-219ENST00000641476 SLC35E2P0CK97 266 aa13.43□□□□□ -0.26
SRRT-219ENST00000641476 GALNSP34059 522 aa13.43□□□□□ -0.26
SRRT-219ENST00000641476 SERPINB9P50453 376 aa13.43□□□□□ -0.26
SRRT-219ENST00000641476 LTBQ06643 244 aa13.43□□□□□ -0.26
SRRT-219ENST00000641476 TBL3Q12788 808 aaKnown RBP13.43□□□□□ -0.26
SRRT-219ENST00000641476 NTRK2Q16620 822 aa13.43□□□□□ -0.26
SRRT-219ENST00000641476 C10orf62Q5T681 223 aaPredicted RBP13.43□□□□□ -0.26
SRRT-219ENST00000641476 RTL6Q6ICC9 239 aa13.43□□□□□ -0.26
SRRT-219ENST00000641476 B3GNT6Q6ZMB0 384 aa13.43□□□□□ -0.26
SRRT-219ENST00000641476 RPS27LQ71UM5 84 aaKnown RBP13.43□□□□□ -0.26
SRRT-219ENST00000641476 GALNT12Q8IXK2 581 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms