RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 MISP3Q96FF7 219 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 C16orf58Q96GQ5 468 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 BOD1Q96IK1 185 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 MUS81Q96NY9 551 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 MCCC1Q96RQ3 725 aaPredicted RBP5.87□□□□□ -1.47
NECAP1-222ENST00000640072 ZNF607Q96SK3 696 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 P2RY13Q9BPV8 354 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 MED10Q9BTT4 135 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 CCDC32Q9BV29 185 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 ZNF552Q9H707 407 aaPredicted RBP5.87□□□□□ -1.47
NECAP1-222ENST00000640072 GFOD1Q9NXC2 390 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 HSF4Q9ULV5 492 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 LYVE1Q9Y5Y7 322 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 NID2Q14112 1375 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 ADAMTSL3P82987 1691 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 TP53BP1Q12888 1972 aaPredicted RBP5.87□□□□□ -1.47
NECAP1-222ENST00000640072 SLC22A23A1A5C7 686 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 C1orf196B1AJZ1 125 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 HRKO00198 91 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 PHYHO14832 338 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 KLRC4O43908 158 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 MMP20O60882 483 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 SDC3O75056 442 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 AKAP3O75969 853 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 PAK4O96013 591 aaPredicted RBP5.87□□□□□ -1.47
NECAP1-222ENST00000640072 PTGER4P35408 488 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 CCR8P51685 355 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 FCGRTP55899 365 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 NRG3P56975 720 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 TNFRSF9Q07011 255 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 AMZ1Q400G9 498 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 GCNT6Q5T4J0 391 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 AVPI1Q5T686 147 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 TSSK4Q6SA08 328 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 RBMS3Q6XE24 437 aaKnown RBP5.87□□□□□ -1.47
NECAP1-222ENST00000640072 IRF2BP2Q7Z5L9 587 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 SYVN1Q86TM6 617 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 FAM35AQ86V20 835 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 DCUN1D3Q8IWE4 304 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 CFAP206Q8IYR0 622 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 OR5T3Q8NGG3 340 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 MRGPRDQ8TDS7 321 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 CANT1Q8WVQ1 401 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 ACOT11Q8WXI4 607 aaPredicted RBP5.87□□□□□ -1.47
NECAP1-222ENST00000640072 SLAMF9Q96A28 289 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 C18orf25Q96B23 403 aaPredicted RBP5.87□□□□□ -1.47
NECAP1-222ENST00000640072 ASB9Q96DX5 294 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 L3HYPDHQ96EM0 354 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 CDCA3Q99618 268 aaPredicted RBP5.87□□□□□ -1.47
NECAP1-222ENST00000640072 MRI1Q9BV20 369 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 ADAP2Q9NPF8 381 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 KRCC1Q9NPI7 259 aaPredicted RBP5.87□□□□□ -1.47
NECAP1-222ENST00000640072 MKKSQ9NPJ1 570 aaPredicted RBP5.87□□□□□ -1.47
NECAP1-222ENST00000640072 SCN3BQ9NY72 215 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 GHRLQ9UBU3 117 aa5.87□□□□□ -1.47
NECAP1-222ENST00000640072 PURGQ9UJV8 347 aaKnown RBP5.87□□□□□ -1.47
NECAP1-222ENST00000640072 FAM240BA0A1B0GVZ2 78 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 PRAMEF22A3QJZ6 481 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 M0R233 179 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 MYL12BO14950 172 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 GALR2O43603 387 aaPredicted RBP5.86□□□□□ -1.47
NECAP1-222ENST00000640072 AIREO43918 545 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 PMPCBO75439 489 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 FAM155BO75949 473 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 TXNDC12O95881 172 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 SCGB1D1O95968 90 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 MYL12AP19105 171 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 NDUFS1P28331 727 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 IDH3AP50213 366 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 CDH8P55286 799 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 ATP5J2P56134 94 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 ATP5IP56385 69 aaPredicted RBP5.86□□□□□ -1.47
NECAP1-222ENST00000640072 HERV-K104P63124 156 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 SPIBQ01892 262 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 PRKCDQ05655 676 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 PRPSAP1Q14558 356 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 NTRK2Q16620 822 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 TTC23Q5W5X9 447 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 ERASQ7Z444 233 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 GPRC5AQ8NFJ5 357 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 PHOSPHO1Q8TCT1 267 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 GLMPQ8WWB7 406 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 SMPDL3AQ92484 453 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 RPL3LQ92901 407 aaKnown RBP5.86□□□□□ -1.47
NECAP1-222ENST00000640072 CDS1Q92903 461 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 RAB1CQ92928 201 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 LRRC46Q96FV0 321 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 CENPNQ96H22 339 aaPredicted RBP5.86□□□□□ -1.47
NECAP1-222ENST00000640072 BTN2A3PQ96KV6 586 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 SLC30A2Q9BRI3 323 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 UTP23Q9BRU9 249 aaKnown RBP5.86□□□□□ -1.47
NECAP1-222ENST00000640072 ELOVL4Q9GZR5 314 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 MS4A5Q9H3V2 200 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 GEMIN7Q9H840 131 aaKnown RBP5.86□□□□□ -1.47
NECAP1-222ENST00000640072 PNPOQ9NVS9 261 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 TMEM160Q9NX00 188 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 GNG8Q9UK08 70 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 TBL2Q9Y4P3 447 aaKnown RBP5.86□□□□□ -1.47
NECAP1-222ENST00000640072 CDY1Q9Y6F8 540 aa5.86□□□□□ -1.47
NECAP1-222ENST00000640072 CHD4Q14839 1912 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms