RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 MDC1Q14676 2089 aaKnown RBP20.31■□□□□ 0.84
CLN6-224ENST00000638076 M0R129 80 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 PROM1O43490 865 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 NARSO43776 548 aaKnown RBP20.3■□□□□ 0.84
CLN6-224ENST00000638076 APBB3O95704 486 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 LCKP06239 509 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 INHBBP09529 407 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 C21orf33P30042 268 aaPredicted RBP20.3■□□□□ 0.84
CLN6-224ENST00000638076 LTBRP36941 435 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 TPMTP51580 245 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 NUDT6P53370 316 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 MRPS21P82921 87 aaKnown RBP20.3■□□□□ 0.84
CLN6-224ENST00000638076 LASP1Q14847 261 aaKnown RBP20.3■□□□□ 0.84
CLN6-224ENST00000638076 TMEM236Q5W0B7 351 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 TMEM107Q6UX40 140 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 VN1R4Q7Z5H5 301 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 TRIM69Q86WT6 500 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 CROCCP3Q8IVE0 287 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 NLGN4XQ8N0W4 816 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 MAPKAP1Q9BPZ7 522 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 SELENONQ9NZV5 590 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 PCOLCE2Q9UKZ9 415 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 CLCA1A8K7I4 914 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 CLPXO76031 633 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 HMGN2P05204 90 aaKnown RBP20.3■□□□□ 0.84
CLN6-224ENST00000638076 F3P13726 295 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 ELAVL4P26378 380 aaKnown RBP20.3■□□□□ 0.84
CLN6-224ENST00000638076 CTSKP43235 329 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 CRISP3P54108 245 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 BTN3A2P78410 334 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 SEC23BQ15437 767 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 MOGQ16653 247 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 BHLHB9Q6PI77 547 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 P2RY8Q86VZ1 359 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 SFXN5Q8TD22 340 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 GGHQ92820 318 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 SLC6A14Q9UN76 642 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 DUSP12Q9UNI6 340 aa20.3■□□□□ 0.84
CLN6-224ENST00000638076 OR2A25A4D2G3 310 aa20.29■□□□□ 0.84
CLN6-224ENST00000638076 CHMP24386 653 aa20.29■□□□□ 0.84
CLN6-224ENST00000638076 DGKEP52429 567 aa20.29■□□□□ 0.84
CLN6-224ENST00000638076 MLLT10P55197 1068 aa20.29■□□□□ 0.84
CLN6-224ENST00000638076 RPS15AP62244 130 aaKnown RBP20.29■□□□□ 0.84
CLN6-224ENST00000638076 DCST1Q5T197 706 aa20.29■□□□□ 0.84
CLN6-224ENST00000638076 DGLUCYQ7Z3D6 616 aa20.29■□□□□ 0.84
CLN6-224ENST00000638076 COMTD1Q86VU5 262 aa20.29■□□□□ 0.84
CLN6-224ENST00000638076 KRT73Q86Y46 540 aa20.29■□□□□ 0.84
CLN6-224ENST00000638076 MYDGFQ969H8 173 aa20.29■□□□□ 0.84
CLN6-224ENST00000638076 BCL7BQ9BQE9 202 aa20.29■□□□□ 0.84
CLN6-224ENST00000638076 FTSJ1Q9UET6 329 aa20.29■□□□□ 0.84
CLN6-224ENST00000638076 NINQ8N4C6 2090 aa20.29■□□□□ 0.84
CLN6-224ENST00000638076 H1F0P07305 194 aaKnown RBP20.28■□□□□ 0.84
CLN6-224ENST00000638076 CSNK2A2P19784 350 aaPredicted RBP20.28■□□□□ 0.84
CLN6-224ENST00000638076 CRISP1P54107 249 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 CDC42P60953 191 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 LSM3P62310 102 aaKnown RBP20.28■□□□□ 0.84
CLN6-224ENST00000638076 TGM3Q08188 693 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 ZNF829Q3KNS6 432 aaPredicted RBP20.28■□□□□ 0.84
CLN6-224ENST00000638076 CHRM4P08173 479 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 POU1F1P28069 291 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 FUT5Q11128 374 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 SFSWAPQ12872 951 aaKnown RBP20.28■□□□□ 0.84
CLN6-224ENST00000638076 LEXMQ3ZCV2 418 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 PRRT3Q5FWE3 981 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 UBE2UQ5VVX9 321 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 FRMPD2BQ6IN97 320 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 KLHL35Q6PF15 583 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 HMGN2P46Q86SG4 172 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 TRIM73Q86UV7 250 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 SLC22A18Q96BI1 424 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 C16orf58Q96GQ5 468 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 DHRS1Q96LJ7 313 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 FKBP14Q9NWM8 211 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 GPR83Q9NYM4 423 aa20.28■□□□□ 0.84
CLN6-224ENST00000638076 TCRBV21S2A2A0A5A6 115 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 M0R3H8 397 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 OR10H3O60404 316 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 CDK1P06493 297 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 FHP07954 510 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 ZNF888P0CJ79 500 aaPredicted RBP20.27■□□□□ 0.84
CLN6-224ENST00000638076 MPIP34949 423 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 BMXP51813 675 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 SRP54P61011 504 aaKnown RBP20.27■□□□□ 0.84
CLN6-224ENST00000638076 TEKQ02763 1124 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 ASPGQ86U10 573 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 OR56A1Q8NGH5 318 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 BBS10Q8TAM1 723 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 GAL3ST3Q96A11 431 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 HSPBAP1Q96EW2 488 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 MSLNLQ96KJ4 702 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 GIMAP4Q9NUV9 329 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 ACAD8Q9UKU7 415 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 A0A0J9YVX5 310 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 A6NCN8 305 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 LRRC72A6NJI9 287 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 ZAR1LA6NP61 321 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 SLC22A1O15245 554 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 ADAP00813 363 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 MAGP20916 626 aa20.27■□□□□ 0.84
CLN6-224ENST00000638076 ANXA11P50995 505 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms