RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 EMX2Q04743 252 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 IL23RQ5VWK5 629 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 RNF111Q6ZNA4 994 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 WDR75Q8IWA0 830 aaKnown RBP14.4□□□□□ -0.1
CLN6-211ENST00000635754 LRRC34Q8IZ02 419 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 BEST3Q8N1M1 668 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 ZNF843Q8N446 348 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 ARFGAP2Q8N6H7 521 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 RBMXL3Q8N7X1 1067 aaKnown RBP14.4□□□□□ -0.1
CLN6-211ENST00000635754 OR8K3Q8NH51 312 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 DOK4Q8TEW6 326 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 CKAP2Q8WWK9 683 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 ZNF764Q96H86 408 aaPredicted RBP14.4□□□□□ -0.1
CLN6-211ENST00000635754 MAGEB18Q96M61 343 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 ZNF681Q96N22 645 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 NPAS2Q99743 824 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 MFRPQ9BY79 579 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 BRINP2Q9C0B6 783 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 REEP4Q9H6H4 257 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 ASIC5Q9NY37 505 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 EXO1Q9UQ84 846 aaKnown RBP14.4□□□□□ -0.1
CLN6-211ENST00000635754 B3GNT3Q9Y2A9 372 aa14.4□□□□□ -0.1
CLN6-211ENST00000635754 HEMK1Q9Y5R4 338 aaPredicted RBP14.4□□□□□ -0.1
CLN6-211ENST00000635754 GABRR3A8MPY1 467 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 SDHDO14521 159 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 WDPCPO95876 746 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 CT62P0C5K7 136 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 DDX5P17844 614 aaKnown RBP14.39□□□□□ -0.11
CLN6-211ENST00000635754 LBPP18428 481 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 RPL3P39023 403 aaKnown RBP14.39□□□□□ -0.11
CLN6-211ENST00000635754 CASRP41180 1078 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 MLF1P58340 268 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 RNF4P78317 190 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 DUSP2Q05923 314 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 PTGR1Q14914 329 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 CEBPEQ15744 281 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 PRICKLE4Q2TBC4 344 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 NADK2Q4G0N4 442 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 SLC6A19Q695T7 634 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 SLC29A4Q7RTT9 530 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 R3HCC1LQ7Z5L2 792 aaKnown RBP14.39□□□□□ -0.11
CLN6-211ENST00000635754 FAM9CQ8IZT9 166 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 ARMC10Q8N2F6 343 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 VWA5B2Q8N398 1253 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 OR5L2Q8NGL0 311 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 HAS2Q92819 552 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 PNPLA2Q96AD5 504 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 PPCDCQ96CD2 204 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 MTERF3Q96E29 417 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 SLCO1B3Q9NPD5 702 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 PLA2G3Q9NZ20 509 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 CNTRLQ7Z7A1 2325 aa14.39□□□□□ -0.11
CLN6-211ENST00000635754 OR5H15A6NDH6 313 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 OR6C76A6NM76 312 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 MYO1GB0I1T2 1018 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 B8ZZF3 427 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 CDK2AP1O14519 115 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 SCAMP2O15127 329 aaKnown RBP14.38□□□□□ -0.11
CLN6-211ENST00000635754 PRKNO60260 465 aaPredicted RBP14.38□□□□□ -0.11
CLN6-211ENST00000635754 MAN1A2O60476 641 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 TBX19O60806 448 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 F10P00742 488 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 SSTR4P31391 388 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 SLC37A1P57057 533 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 C19orf57Q0VDD7 668 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 FUT7Q11130 342 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 MAP4K2Q12851 820 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 TLR1Q15399 786 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 LARP4Q71RC2 724 aaKnown RBP eCLIP14.38□□□□□ -0.11
CLN6-211ENST00000635754 CCDC116Q8IYX3 515 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 ADCY4Q8NFM4 1077 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 OR7G1Q8NGA0 311 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 ZNF675Q8TD23 568 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 UTP23Q9BRU9 249 aaKnown RBP14.38□□□□□ -0.11
CLN6-211ENST00000635754 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.38□□□□□ -0.11
CLN6-211ENST00000635754 MAT2BQ9NZL9 334 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 SH3BP4Q9P0V3 963 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 MYOTQ9UBF9 498 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 CSAG2Q9Y5P2 127 aa14.38□□□□□ -0.11
CLN6-211ENST00000635754 GOLGA8QA0A0J9YX86 632 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 GOLGA8OA6NCC3 632 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 GOLGA8NF8WBI6 632 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 PDPK1O15530 556 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 ITGA10O75578 1167 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 G6PDP11413 515 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 PRPS1L1P21108 318 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 EPHA3P29320 983 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 PTGER1P34995 402 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 NCBP2P52298 156 aaKnown RBP eCLIP14.37□□□□□ -0.11
CLN6-211ENST00000635754 PDE7AQ13946 482 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 LTB4RQ15722 352 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 PRSS53Q2L4Q9 553 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 OGFOD2Q6N063 350 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 ANKRD26P1Q6NSI1 321 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 FAM111BQ6SJ93 734 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 RGS9BPQ6ZS82 235 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 Q6ZS92 163 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 FAM47EQ6ZV65 393 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 C9orf40Q8IXQ3 194 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 OR9A2Q8NGT5 310 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms