RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 RBM24Q9BX46 236 aaKnown RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 LSG1Q9H089 658 aaKnown RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ADNPQ9H2P0 1102 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 TUBB1Q9H4B7 451 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 C10orf88Q9H8K7 445 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 WDR41Q9HAD4 459 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 PLEKHA3Q9HB20 300 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ABCB10Q9NRK6 738 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 MRGBPQ9NV56 204 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 EXOC1Q9NV70 894 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 CHCHD3Q9NX63 227 aaKnown RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 GTSE1Q9NYZ3 720 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 THAP10Q9P2Z0 257 aaPredicted RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ABCD2Q9UBJ2 740 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 FBXL4Q9UKA2 621 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 PILRBQ9UKJ0 227 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 KLK13Q9UKR3 277 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ITGA11Q9UKX5 1188 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 MGAT4AQ9UM21 535 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 CCL27Q9Y4X3 112 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 RPAP1Q9BWH6 1393 aaPredicted RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 CDH23Q9H251 3354 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 LAMA2P24043 3122 aaKnown RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 EML6Q6ZMW3 1958 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 DOCK4Q8N1I0 1966 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 KIAA1549Q9HCM3 1950 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ZDBF2Q9HCK1 2354 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 COL6A3P12111 3177 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 C5orf42Q9H799 3197 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 UMODL1Q5DID0 1318 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 SH3TC1Q8TE82 1336 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 FANCIQ9NVI1 1328 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 MAPK8IP3Q9UPT6 1336 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 ASCC3Q8N3C0 2202 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 UNC80Q8N2C7 3258 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 EXPH5Q8NEV8 1989 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 IGLV4-3A0A075B6K6 122 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 IGHV3OR16-10A0A075B7F0 116 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 IGHV4-30-2A0A087WSY4 118 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 CCL15-CCL14A0A0B4J2E2 113 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 TRGV8A0A0C4DH27 118 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 MTMR11A4FU01 709 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 HTR3EA5X5Y0 456 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 IGLON5A6NGN9 336 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 KLLNB2CW77 178 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF732B4DXR9 585 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 KBTBD13C9JR72 458 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 E9PAM4 449 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 NPIPA3F8WFD2 350 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 H7C0S8 307 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 K7EQD1 137 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 M0R296 226 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 PSMA7O14818 248 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 FLRT2O43155 660 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 ST8SIA3O43173 380 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 PHF1O43189 567 aaPredicted RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 MLNRO43193 412 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 SH3BGRLO75368 114 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 LRCH4O75427 683 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 KRT33AO76009 404 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 GAS8O95995 478 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 CENPBP07199 599 aaPredicted RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 GSTA2P09210 222 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 FAM58BPP0C7Q3 252 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 DLATP10515 647 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 PCP11498 1178 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 GP1BBP13224 206 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 HSD17B1P14061 328 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 ITIH1P19827 911 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 KLK2P20151 261 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 CALML3P27482 149 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 CCND3P30281 292 aaPredicted RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 ADORA1P30542 326 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 DUTP33316 252 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 GP5P40197 560 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 MATKP42679 507 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 GYG1P46976 350 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 PGFP49763 221 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 KHKP50053 298 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 ADARP55265 1226 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 EVCP57679 992 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 PTENP60484 403 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 SRPXP78539 464 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 AKAP17AQ02040 695 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 ACY1Q03154 408 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 TCP10Q12799 353 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 CNTN1Q12860 1018 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 TRA2AQ13595 282 aaKnown RBP eCLIP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 PTK6Q13882 451 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 CEACAM7Q14002 265 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 VGLL4Q14135 290 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 PPA1Q15181 289 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 RPS6KA1Q15418 735 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 TRADDQ15628 312 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 MLF2Q15773 248 aaPredicted RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 CCL14Q16627 93 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 CCL15Q16663 113 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 KNOP1Q1ED39 458 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 GLIPR1L2Q4G1C9 344 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms