RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 STAMBPL1Q96FJ0 436 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 IFT74Q96LB3 600 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SENP8Q96LD8 212 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SGK494Q96LW2 274 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF385AQ96PM9 386 aaKnown RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 PI4K2AQ9BTU6 479 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 FGFBP2Q9BYJ0 223 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ARRDC1-AS1Q9H2J1 176 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ASB7Q9H672 318 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ECT2Q9H8V3 914 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 UBTD1Q9HAC8 227 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SDF2L1Q9HCN8 221 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 KLHL1Q9NR64 748 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 OLFML3Q9NRN5 406 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF701Q9NV72 531 aaPredicted RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 DNAJC17Q9NVM6 304 aaKnown RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 PILRBQ9UKJ0 227 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 RAB23Q9ULC3 237 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 MMP17Q9ULZ9 603 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 VDAC3Q9Y277 283 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 DLGAP4Q9Y2H0 992 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 NF1P21359 2839 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 COL6A6A6NMZ7 2263 aa2.28□□□□□ -2.05
SMARCB1-208ENST00000634926 FBN2P35556 2912 aa2.28□□□□□ -2.05
SMARCB1-208ENST00000634926 CABIN1Q9Y6J0 2220 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 CHD5Q8TDI0 1954 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 ZNF469Q96JG9 3925 aaPredicted RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 TRAV24A0A0B4J272 114 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 A0A1W2PPW3 197 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 GTPBP10A4D1E9 387 aaKnown RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 CCDC169A6NNP5 214 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 ANKRD63C9JTQ0 380 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 H0YCG3 227 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 ST8SIA3O43173 380 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 CACNG3O60359 315 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 ATP6AP2O75787 350 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 PDE9AO76083 593 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 SLC16A8O95907 504 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 PAK4O96013 591 aaPredicted RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 IGLV3-19P01714 112 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 C9P02748 559 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 LIPFP07098 398 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 KRT19P08727 400 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 SMIM18P0DKX4 95 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 UROSP10746 265 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 ACP2P11117 423 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 HLA-DOBP13765 273 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 CD59P13987 128 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 ITGA2P17301 1181 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 CYP2F1P24903 491 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 PTGER3P43115 390 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 RPL21P46778 160 aaKnown RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 CDX1P47902 265 aaPredicted RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 TUFMP49411 452 aaKnown RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 NOVA1P51513 510 aaKnown RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 DLX5P56178 289 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 KIAA1024LP59773 190 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 TUBA1BP68363 451 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 HMGN5P82970 282 aaKnown RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 RELQ04864 619 aaPredicted RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 RPA4Q13156 261 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 VEZF1Q14119 521 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 RBM39Q14498 530 aaKnown RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 TMEM132DQ14C87 1099 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 TAZQ16635 292 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 CA9Q16790 459 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 DUOXA1Q1HG43 343 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 ZC2HC1CQ53FD0 456 aaPredicted RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 LACTB2Q53H82 288 aaPredicted RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 LBHQ53QV2 105 aaPredicted RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 NDUFAF5Q5TEU4 345 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 WSCD1Q658N2 575 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 C11orf63Q6NUN7 778 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 CASC4Q6P4E1 433 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 TMEM270Q6UE05 265 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 PACS1Q6VY07 963 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 ZNF720Q7Z2F6 126 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 ARHGAP22Q7Z5H3 698 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 NRARPQ7Z6K4 114 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 CCDC83Q8IWF9 413 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 TMEM86AQ8N2M4 240 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 RYBPQ8N488 228 aaPredicted RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 BMPERQ8N8U9 685 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 MAB21L3Q8N8X9 362 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 AMER3Q8N944 861 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 RASGEF1AQ8N9B8 481 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 THAP8Q8NA92 274 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 NPEPL1Q8NDH3 523 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 OR13J1Q8NGT2 312 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 VANGL1Q8TAA9 524 aaPredicted RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 FGFBP3Q8TAT2 258 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 SPATA20Q8TB22 786 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 FIG4Q92562 907 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 PROX1Q92786 737 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 RIT1Q92963 219 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 BSCL2Q96G97 398 aaPredicted RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 OXNAD1Q96HP4 312 aaPredicted RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 C8orf76Q96K31 380 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 AK8Q96MA6 479 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 ZNF560Q96MR9 790 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms