RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 CLEC18BQ6UXF7 455 aa17.41■□□□□ 0.38
PNKP-224ENST00000631020 RBMXL3Q8N7X1 1067 aaKnown RBP17.41■□□□□ 0.38
PNKP-224ENST00000631020 CLEC18CQ8NCF0 446 aa17.41■□□□□ 0.38
PNKP-224ENST00000631020 OR7A2PQ8NGA2 310 aa17.41■□□□□ 0.38
PNKP-224ENST00000631020 OR11G2Q8NGC1 345 aa17.41■□□□□ 0.38
PNKP-224ENST00000631020 CPT1CQ8TCG5 803 aa17.41■□□□□ 0.38
PNKP-224ENST00000631020 EXOSC8Q96B26 276 aaKnown RBP17.41■□□□□ 0.38
PNKP-224ENST00000631020 PPWD1Q96BP3 646 aaKnown RBP17.41■□□□□ 0.38
PNKP-224ENST00000631020 KLHL29Q96CT2 875 aa17.41■□□□□ 0.38
PNKP-224ENST00000631020 WDR77Q9BQA1 342 aaPredicted RBP17.41■□□□□ 0.38
PNKP-224ENST00000631020 MIEF1Q9NQG6 463 aa17.41■□□□□ 0.38
PNKP-224ENST00000631020 SLC35C2Q9NQQ7 365 aa17.41■□□□□ 0.38
PNKP-224ENST00000631020 SDR39U1Q9NRG7 319 aaPredicted RBP17.41■□□□□ 0.38
PNKP-224ENST00000631020 ATP6V1HQ9UI12 483 aa17.41■□□□□ 0.38
PNKP-224ENST00000631020 PSME2Q9UL46 239 aa17.41■□□□□ 0.38
PNKP-224ENST00000631020 MASP2O00187 686 aa17.4■□□□□ 0.38
PNKP-224ENST00000631020 SCAMP2O15127 329 aaKnown RBP17.4■□□□□ 0.38
PNKP-224ENST00000631020 TBX19O60806 448 aa17.4■□□□□ 0.38
PNKP-224ENST00000631020 PRPS1L1P21108 318 aa17.4■□□□□ 0.38
PNKP-224ENST00000631020 PIK3R1P27986 724 aa17.4■□□□□ 0.38
PNKP-224ENST00000631020 IL12AP29459 219 aa17.4■□□□□ 0.38
PNKP-224ENST00000631020 FEN1P39748 380 aaKnown RBP17.4■□□□□ 0.38
PNKP-224ENST00000631020 OR4D2P58180 307 aa17.4■□□□□ 0.38
PNKP-224ENST00000631020 GSTA3Q16772 222 aa17.4■□□□□ 0.38
PNKP-224ENST00000631020 SFT2D3Q587I9 215 aa17.4■□□□□ 0.38
PNKP-224ENST00000631020 COLEC12Q5KU26 742 aa17.4■□□□□ 0.38
PNKP-224ENST00000631020 SLC6A19Q695T7 634 aa17.4■□□□□ 0.38
PNKP-224ENST00000631020 DGAT2L6Q6ZPD8 337 aa17.4■□□□□ 0.38
PNKP-224ENST00000631020 SPATA21Q7Z572 469 aa17.4■□□□□ 0.38
PNKP-224ENST00000631020 CPEB2Q7Z5Q1 589 aaKnown RBP17.4■□□□□ 0.38
PNKP-224ENST00000631020 GALNT11Q8NCW6 608 aa17.4■□□□□ 0.38
PNKP-224ENST00000631020 TM9SF4Q92544 642 aa17.4■□□□□ 0.38
PNKP-224ENST00000631020 ZNF552Q9H707 407 aaPredicted RBP17.4■□□□□ 0.38
PNKP-224ENST00000631020 A0A1W2PQ72 361 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 A8MUA0 341 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 PCDH17O14917 1159 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 SNX3O60493 162 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 CPMP14384 443 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 EEF1A2Q05639 463 aaKnown RBP17.39■□□□□ 0.37
PNKP-224ENST00000631020 SERTAD2Q14140 314 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 PCOLCEQ15113 449 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 RPS6KA2Q15349 733 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 PDCD4Q53EL6 469 aaKnown RBP17.39■□□□□ 0.37
PNKP-224ENST00000631020 PIGWQ7Z7B1 504 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 PPCDCQ96CD2 204 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 COQ8BQ96D53 544 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 MTERF3Q96E29 417 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 ZNF764Q96H86 408 aaPredicted RBP17.39■□□□□ 0.37
PNKP-224ENST00000631020 DPY30Q9C005 99 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 ZNF700Q9H0M5 742 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 ZNF385DQ9H6B1 395 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 PNO1Q9NRX1 252 aaKnown RBP17.39■□□□□ 0.37
PNKP-224ENST00000631020 SH3BP4Q9P0V3 963 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 FBXL4Q9UKA2 621 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 COPG1Q9Y678 874 aaKnown RBP17.39■□□□□ 0.37
PNKP-224ENST00000631020 SHANK1Q9Y566 2161 aa17.39■□□□□ 0.37
PNKP-224ENST00000631020 IGHV1-45A0A0A0MS14 117 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 C9JVG2 144 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 SLC35E2P0CK97 266 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 LAMP1P11279 417 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 COX6A1P12074 109 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 NCF2P19878 526 aaPredicted RBP17.38■□□□□ 0.37
PNKP-224ENST00000631020 GPX3P22352 226 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 PTGER1P34995 402 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 HPCAL1P37235 193 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 STT3AP46977 705 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 ZFP36L2P47974 494 aaKnown RBP17.38■□□□□ 0.37
PNKP-224ENST00000631020 CEBPEQ15744 281 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 METTL21CQ5VZV1 264 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 FAM9CQ8IZT9 166 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 Q8NA96 180 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 DOK4Q8TEW6 326 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 PTPMT1Q8WUK0 201 aaPredicted RBP17.38■□□□□ 0.37
PNKP-224ENST00000631020 CIDECQ96AQ7 238 aaPredicted RBP17.38■□□□□ 0.37
PNKP-224ENST00000631020 CCT8L2Q96SF2 557 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 NSRP1Q9H0G5 558 aaKnown RBP17.38■□□□□ 0.37
PNKP-224ENST00000631020 SLAMF7Q9NQ25 335 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 ZNF780BQ9Y6R6 833 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 COL12A1Q99715 3063 aa17.38■□□□□ 0.37
PNKP-224ENST00000631020 DOPEY2Q9Y3R5 2298 aa17.37■□□□□ 0.37
PNKP-224ENST00000631020 MYO1GB0I1T2 1018 aa17.37■□□□□ 0.37
PNKP-224ENST00000631020 SEC24DO94855 1032 aaPredicted RBP17.37■□□□□ 0.37
PNKP-224ENST00000631020 IFNA16P05015 189 aa17.37■□□□□ 0.37
PNKP-224ENST00000631020 COX7A2P14406 83 aa17.37■□□□□ 0.37
PNKP-224ENST00000631020 CD1EP15812 388 aa17.37■□□□□ 0.37
PNKP-224ENST00000631020 PORP16435 677 aaPredicted RBP17.37■□□□□ 0.37
PNKP-224ENST00000631020 CSNK2A2P19784 350 aaPredicted RBP17.37■□□□□ 0.37
PNKP-224ENST00000631020 SOX18P35713 384 aa17.37■□□□□ 0.37
PNKP-224ENST00000631020 MRPL19P49406 292 aaKnown RBP17.37■□□□□ 0.37
PNKP-224ENST00000631020 BIKQ13323 160 aa17.37■□□□□ 0.37
PNKP-224ENST00000631020 RAPSNQ13702 412 aa17.37■□□□□ 0.37
PNKP-224ENST00000631020 UBAP2LQ14157 1087 aaKnown RBP17.37■□□□□ 0.37
PNKP-224ENST00000631020 PAOXQ6QHF9 649 aa17.37■□□□□ 0.37
PNKP-224ENST00000631020 R3HCC1LQ7Z5L2 792 aaKnown RBP17.37■□□□□ 0.37
PNKP-224ENST00000631020 CCDC116Q8IYX3 515 aa17.37■□□□□ 0.37
PNKP-224ENST00000631020 ST13P4Q8IZP2 240 aaPredicted RBP17.37■□□□□ 0.37
PNKP-224ENST00000631020 OR9I1Q8NGQ6 314 aa17.37■□□□□ 0.37
PNKP-224ENST00000631020 SUN3Q8TAQ9 357 aa17.37■□□□□ 0.37
PNKP-224ENST00000631020 RBM18Q96H35 190 aaKnown RBP17.37■□□□□ 0.37
PNKP-224ENST00000631020 IMMP1LQ96LU5 166 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms