RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	MAT2B	Q9NZL9	334 aa		24.24	■■□□□ 1.47
UBE3A-222	ENST00000630907	COPS7A	Q9UBW8	275 aa		24.24	■■□□□ 1.47
UBE3A-222	ENST00000630907	ERVK-19	Q9WJR5	959 aa		24.24	■■□□□ 1.47
UBE3A-222	ENST00000630907	DSP	P15924	2871 aa	Known RBP	24.24	■■□□□ 1.47
UBE3A-222	ENST00000630907	MED13	Q9UHV7	2174 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	HRK	O00198	91 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	CT62	P0C5K7	136 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	SEC24C	P53992	1094 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	MGAT2	Q10469	447 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	SF3A3	Q12874	501 aa	Known RBP eCLIP	24.23	■■□□□ 1.47	4e-6	■■■■□ 24.7
UBE3A-222	ENST00000630907	RAPSN	Q13702	412 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	LTB4R	Q15722	352 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	PGS1	Q32NB8	556 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	FAM111B	Q6SJ93	734 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	KIF2B	Q8N4N8	673 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	ZNF321P	Q8N8H1	164 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	OR9A2	Q8NGT5	310 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	ZNF675	Q8TD23	568 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	BRIX1	Q8TDN6	353 aa	Known RBP	24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	AMDHD1	Q96NU7	426 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	NUDT9	Q9BW91	350 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	SEMA4C	Q9C0C4	833 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	GLIPR2	Q9H4G4	154 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	SLAMF7	Q9NQ25	335 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	SDR39U1	Q9NRG7	319 aa	Predicted RBP	24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	GPR83	Q9NYM4	423 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	KLHL14	Q9P2G3	628 aa		24.23	■■□□□ 1.47
UBE3A-222	ENST00000630907	CROCC	Q5TZA2	2017 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	TRBV11-1	A0A0K0K1C0	115 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	GMNC	A6NCL1	334 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	MKRN2OS	H3BPM6	223 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	IGKV3-11	P04433	115 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	STX1B	P61266	288 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	ZNF628	Q5EBL2	1059 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	CAMKMT	Q7Z624	323 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	MIER2	Q8N344	545 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	VWA5B2	Q8N398	1253 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	ZFP28	Q8NHY6	868 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	PSMF1	Q92530	271 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	TESC	Q96BS2	214 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	ZBED6CL	Q96FA7	236 aa	Predicted RBP	24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	TEX37	Q96LM6	180 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	ZBTB18	Q99592	522 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	SLC25A23	Q9BV35	468 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	DUSP26	Q9BV47	211 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	DEFB126	Q9BYW3	111 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	BHLHE41	Q9C0J9	482 aa	Predicted RBP	24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	CLMP	Q9H6B4	373 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	ACSS1	Q9NUB1	689 aa	Predicted RBP	24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	ZIM2	Q9NZV7	527 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	ZNF223	Q9UK11	482 aa	Predicted RBP	24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907	TRIM33	Q9UPN9	1127 aa		24.22	■■□□□ 1.47
UBE3A-222	ENST00000630907		A8MUI8	341 aa		24.21	■■□□□ 1.47
UBE3A-222	ENST00000630907	SLC22A3	O75751	556 aa		24.21	■■□□□ 1.47
UBE3A-222	ENST00000630907	FRK	P42685	505 aa	Predicted RBP	24.21	■■□□□ 1.47
UBE3A-222	ENST00000630907	MANF	P55145	182 aa	Known RBP	24.21	■■□□□ 1.47
UBE3A-222	ENST00000630907	SRSF11	Q05519	484 aa	Known RBP	24.21	■■□□□ 1.47
UBE3A-222	ENST00000630907	FUT7	Q11130	342 aa		24.21	■■□□□ 1.47
UBE3A-222	ENST00000630907	HSDL2	Q6YN16	418 aa		24.21	■■□□□ 1.47
UBE3A-222	ENST00000630907	SIRT6	Q8N6T7	355 aa		24.21	■■□□□ 1.47
UBE3A-222	ENST00000630907	GLB1L3	Q8NCI6	653 aa	Predicted RBP	24.21	■■□□□ 1.47
UBE3A-222	ENST00000630907	CTHRC1	Q96CG8	243 aa		24.21	■■□□□ 1.47
UBE3A-222	ENST00000630907	NSRP1	Q9H0G5	558 aa	Known RBP	24.21	■■□□□ 1.47
UBE3A-222	ENST00000630907	ZNF552	Q9H707	407 aa	Predicted RBP	24.21	■■□□□ 1.47
UBE3A-222	ENST00000630907	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	24.21	■■□□□ 1.47
UBE3A-222	ENST00000630907	LHX6	Q9UPM6	363 aa		24.21	■■□□□ 1.47
UBE3A-222	ENST00000630907	PCDHGA9	Q9Y5G4	932 aa	Known RBP	24.21	■■□□□ 1.47
UBE3A-222	ENST00000630907	CACNA1B	Q00975	2339 aa		24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	ZFAND5	O76080	213 aa		24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	FAM87A	P0C7U9	286 aa		24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	IL12A	P29459	219 aa		24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	SSTR4	P31391	388 aa		24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	MRPL19	P49406	292 aa	Known RBP	24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	IRX1	P78414	480 aa	Predicted RBP	24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	MRPS35	P82673	323 aa	Known RBP	24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	DPY19L1	Q2PZI1	675 aa		24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	TRMT12	Q53H54	448 aa	Known RBP	24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	AGAP7P	Q5VUJ5	663 aa		24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	H3F3C	Q6NXT2	135 aa		24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	RNF111	Q6ZNA4	994 aa		24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	ZNF551	Q7Z340	670 aa	Predicted RBP	24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	OR7G1	Q8NGA0	311 aa		24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	KAT2A	Q92830	837 aa		24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	AGAP4	Q96P64	663 aa		24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	PTGFRN	Q9P2B2	879 aa		24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	ZNF639	Q9UID6	485 aa		24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907	CFAP47	Q6ZTR5	3102 aa		24.2	■■□□□ 1.46
UBE3A-222	ENST00000630907		A0A1W2PRB8	838 aa		24.19	■■□□□ 1.46
UBE3A-222	ENST00000630907	ERVH48-1	M5A8F1	160 aa		24.19	■■□□□ 1.46
UBE3A-222	ENST00000630907	SLITRK5	O94991	958 aa		24.19	■■□□□ 1.46
UBE3A-222	ENST00000630907	NCF2	P19878	526 aa	Predicted RBP	24.19	■■□□□ 1.46
UBE3A-222	ENST00000630907	EFNA1	P20827	205 aa	Predicted RBP	24.19	■■□□□ 1.46
UBE3A-222	ENST00000630907	S1PR1	P21453	382 aa		24.19	■■□□□ 1.46
UBE3A-222	ENST00000630907	SOX18	P35713	384 aa		24.19	■■□□□ 1.46
UBE3A-222	ENST00000630907	KIR3DL1	P43629	444 aa		24.19	■■□□□ 1.46
UBE3A-222	ENST00000630907	ATP4B	P51164	291 aa		24.19	■■□□□ 1.46
UBE3A-222	ENST00000630907	HSPB3	Q12988	150 aa		24.19	■■□□□ 1.46
UBE3A-222	ENST00000630907	KCNAB2	Q13303	367 aa		24.19	■■□□□ 1.46
UBE3A-222	ENST00000630907	CRB2	Q5IJ48	1285 aa		24.19	■■□□□ 1.46
UBE3A-222	ENST00000630907	SPANXN4	Q5MJ08	99 aa		24.19	■■□□□ 1.46

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms