RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 SMPD3Q9NY59 655 aaPredicted RBP11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 SH2B3Q9UQQ2 575 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 PTRH2Q9Y3E5 179 aaKnown RBP11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 ARID1BQ8NFD5 2236 aaPredicted RBP11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 CCDC187A0A096LP49 1063 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 CLIC3O95833 236 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 BCKDHAP12694 445 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 GGT1P19440 569 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 NCBP2P52298 156 aaKnown RBP eCLIP11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 SPANXN4Q5MJ08 99 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 PITHD1Q9GZP4 211 aaPredicted RBP11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 REEP1Q9H902 201 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 SERHLQ9NQF3 203 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 LYARQ9NX58 379 aaKnown RBP11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 C5AR2Q9P296 337 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 COPS7AQ9UBW8 275 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 WARS2Q9UGM6 360 aaKnown RBP11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 CYP7B1O75881 506 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 CD1CP29017 333 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 CRATP43155 626 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 NSDHLQ15738 373 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 PRAMEF17Q5VTA0 474 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 FAM180BQ6P0A1 224 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 DUSP26Q9BV47 211 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 ACPTQ9BZG2 426 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 OR8D2Q9GZM6 311 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 CCDC90BQ9GZT6 254 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 CLMPQ9H6B4 373 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 DNAJB9Q9UBS3 223 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 PADI1Q9ULC6 663 aa11.77□□□□□ -0.52
SYNGAP1-207ENST00000628646 A0A096LPI6 279 aa11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 MT-ND1P03886 318 aa11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 ZNF883P0CG24 379 aa11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 MPIP34949 423 aa11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 GGTA1PQ4G0N0 100 aa11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 FRMPD2BQ6IN97 320 aa11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 ADNP2Q6IQ32 1131 aa11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 OR4D9Q8NGE8 314 aa11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 PNPT1Q8TCS8 783 aaKnown RBP11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 SEMA3GQ9NS98 782 aa11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 DNAAF2Q9NVR5 837 aaKnown RBP11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 ZNF282Q9UDV7 671 aaPredicted RBP11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 TRIM64BA6NI03 449 aa11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 H0YIV9 168 aa11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 B3GNT6Q6ZMB0 384 aa11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 ASCL5Q7RTU5 278 aa11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 ZNF551Q7Z340 670 aaPredicted RBP11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 SAMD14Q8IZD0 417 aaPredicted RBP11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 C8orf59Q8N0T1 100 aaPredicted RBP11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 L3MBTL4Q8NA19 623 aa11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 SLC9A6Q92581 669 aa11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 ZBED6CLQ96FA7 236 aaPredicted RBP11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 MPP4Q96JB8 637 aa11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 SPNS1Q9H2V7 528 aa11.77□□□□□ -0.53
SYNGAP1-207ENST00000628646 CPNE3O75131 537 aaKnown RBP11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 FOLR1P15328 257 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 GSTM2P28161 218 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 PPP2R1BP30154 601 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 GABREP78334 506 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 TARDBPQ13148 414 aaKnown RBP eCLIP11.76□□□□□ -0.531e-6■■■■□ 23.6
SYNGAP1-207ENST00000628646 BHLHB9Q6PI77 547 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 ATG16L2Q8NAA4 619 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 OR4K1Q8NGD4 311 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 SOX17Q9H6I2 414 aaPredicted RBP11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 GORASP2Q9H8Y8 452 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 C19orf25Q9UFG5 118 aaPredicted RBP11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 HS6ST1O60243 411 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 ITGA2P17301 1181 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 XKP51811 444 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 RPS6KA3P51812 740 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 NHLH1Q02575 133 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 DGLUCYQ7Z3D6 616 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 CYP4Z1Q86W10 505 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 SUMF1Q8NBK3 374 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 OR4K14Q8NGD5 310 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 SPPL2AQ8TCT8 520 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 APOL4Q9BPW4 351 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 RBM4BQ9BQ04 359 aaKnown RBP11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 RBM4Q9BWF3 364 aaKnown RBP11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 YTHDF1Q9BYJ9 559 aaKnown RBP11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 A0A1W2PRB8 838 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 ANKRD33BA6NCL7 494 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 G3V2T6 193 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 SNAP29O95721 258 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 C1QCP02747 245 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 CDK4P11802 303 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 TDGF1P13385 188 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 HIST1H1TP22492 207 aaPredicted RBP11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 RSPO4Q2I0M5 234 aaPredicted RBP11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 OR4F3Q6IEY1 312 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 CALHM3Q86XJ0 350 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 KMT5CQ86Y97 462 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 P3H2Q8IVL5 708 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 CCDC116Q8IYX3 515 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 KRTCAP2Q8N6L1 136 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 C11orf65Q8NCR3 313 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 OR52E4Q8NGH9 312 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 FAM60AQ9NP50 221 aa11.76□□□□□ -0.53
SYNGAP1-207ENST00000628646 PCDHGB2Q9Y5G2 931 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms