RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 PPP5CP53041 499 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 ALDH6A1Q02252 535 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 PRKCDQ05655 676 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 C2orf80Q0P641 193 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 CBX3Q13185 183 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 CEBPEQ15744 281 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 EXOC3L2Q2M3D2 409 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 RAET1GQ6H3X3 334 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 KIAA1161Q6NSJ0 714 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 POMZP3Q6PJE2 187 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 ZNF367Q7RTV3 350 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 OR5K2Q8NHB8 316 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 SVIPQ8NHG7 77 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 OR5P2Q8WZ92 322 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 PROX1Q92786 737 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 RPL3LQ92901 407 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 PPCDCQ96CD2 204 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 MSLNLQ96KJ4 702 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 COL21A1Q96P44 957 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 SLC6A16Q9GZN6 736 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 MIR1-1HGQ9H1L0 117 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 CCDC177Q9NQR7 707 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 SNX4O95219 450 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 C6P13671 934 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 ADRB3P13945 408 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 ALOX12P18054 663 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 OPRD1P41143 372 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 METAP1P53582 386 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 MED22Q15528 200 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 UAP1L1Q3KQV9 507 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 KLHL17Q6TDP4 642 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 MTSS1LQ765P7 747 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 MRGPREQ86SM8 312 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 CLIP4Q8N3C7 705 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 ANKRD53Q8N9V6 530 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 GPR32P1Q8NGA4 272 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 NFKBIDQ8NI38 313 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 NXPE3Q969Y0 559 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 RAB7BQ96AH8 199 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 TM4SF18Q96CE8 201 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 CHCHD6Q9BRQ6 235 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 PLA2G2FQ9BZM2 168 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 DSN1Q9H410 356 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 CXorf36Q9H7Y0 433 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 SLAMF7Q9NQ25 335 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 ACSS1Q9NUB1 689 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 OBP2AQ9NY56 170 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 SH3BGRL2Q9UJC5 107 aa6.8□□□□□ -1.32
CTNNA1-244ENST00000627109 TMEM221A6NGB7 291 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 ANKDD1BA6NHY2 528 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 H3BN98 237 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 SMAD7O15105 426 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 ADAP00813 363 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 KELP23276 732 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 GRK5P34947 590 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 CTSKP43235 329 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 MC1RQ01726 317 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 ILKQ13418 452 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 MADCAM1Q13477 382 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 PIN1Q13526 163 aaPredicted RBP6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 PPA1Q15181 289 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 SMAD2Q15796 467 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 GFOD2Q3B7J2 385 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 LEXMQ3ZCV2 418 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 DEPDC1Q5TB30 811 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 KHDRBS2Q5VWX1 349 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 METRNLQ641Q3 311 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 C16orf54Q6UWD8 224 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 USP43Q70EL4 1123 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 DCUN1D3Q8IWE4 304 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 LGI4Q8N135 537 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 SLC44A3Q8N4M1 653 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 FAM26EQ8N5C1 309 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 GANCQ8TET4 914 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 HPS1Q92902 700 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 DDX31Q9H8H2 851 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 HCN2Q9UL51 889 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 ANGPT4Q9Y264 503 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 RBMX2Q9Y388 322 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 ZFHX2Q9C0A1 2572 aaPredicted RBP6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 A0A0A6YYD5 115 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 A0A1W2PRB8 838 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 EFCAB9A8MZ26 197 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 AIREO43918 545 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 TGFBR1P36897 503 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 LIM2P55344 173 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 TAS2R50P59544 299 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 DOC2BQ14184 412 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 ELAVL3Q14576 367 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 ZIC1Q15915 447 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 ZNF181Q2M3W8 571 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 PRAMEF14Q5SWL7 426 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 PRAMEF13Q5VWM6 474 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 SLX4IPQ5VYV7 408 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 REEP3Q6NUK4 255 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 KIAA1211LQ6NV74 962 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 PLEKHG7Q6ZR37 379 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 UBE3DQ7Z6J8 389 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 RNF130Q86XS8 419 aa6.79□□□□□ -1.32
CTNNA1-244ENST00000627109 TEX101Q9BY14 249 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms