RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 ZNF227Q86WZ6 799 aa15.52■□□□□ 0.08
UBE3D-208ENST00000626828 MMP21Q8N119 569 aa15.52■□□□□ 0.08
UBE3D-208ENST00000626828 CYP4Z2PQ8N1L4 340 aa15.52■□□□□ 0.08
UBE3D-208ENST00000626828 SLC15A4Q8N697 577 aa15.52■□□□□ 0.08
UBE3D-208ENST00000626828 OR7G1Q8NGA0 311 aa15.52■□□□□ 0.08
UBE3D-208ENST00000626828 NR4A3Q92570 626 aa15.52■□□□□ 0.08
UBE3D-208ENST00000626828 KLHL29Q96CT2 875 aa15.52■□□□□ 0.08
UBE3D-208ENST00000626828 HES7Q9BYE0 225 aa15.52■□□□□ 0.08
UBE3D-208ENST00000626828 TIMMDC1Q9NPL8 285 aa15.52■□□□□ 0.08
UBE3D-208ENST00000626828 HPF1Q9NWY4 346 aa15.52■□□□□ 0.08
UBE3D-208ENST00000626828 C1orf109Q9NX04 203 aa15.52■□□□□ 0.08
UBE3D-208ENST00000626828 EHD3Q9NZN3 535 aa15.52■□□□□ 0.08
UBE3D-208ENST00000626828 UTS2RQ9UKP6 389 aa15.52■□□□□ 0.08
UBE3D-208ENST00000626828 KLF13Q9Y2Y9 288 aaPredicted RBP15.52■□□□□ 0.08
UBE3D-208ENST00000626828 FIS1Q9Y3D6 152 aa15.52■□□□□ 0.08
UBE3D-208ENST00000626828 DNAJC15Q9Y5T4 150 aa15.52■□□□□ 0.08
UBE3D-208ENST00000626828 A0A1W2PS29 197 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 ASPDHA6ND91 283 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 NME2P1O60361 137 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 ZWINTO95229 277 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 ATP1B1P05026 303 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 NEFHP12036 1026 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 NME2P22392 152 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 UQCRFS1P47985 274 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 ZNF763Q0D2J5 394 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 MRPL49Q13405 166 aaKnown RBP15.51■□□□□ 0.07
UBE3D-208ENST00000626828 KIAA0040Q15053 153 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.51■□□□□ 0.07
UBE3D-208ENST00000626828 C9orf40Q8IXQ3 194 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 PRR7Q8TB68 274 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 TP53INP1Q96A56 240 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 SGCZQ96LD1 299 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 ZNF681Q96N22 645 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 SLX1AQ9BQ83 275 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 EBPLQ9BY08 206 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 OR10A5Q9H207 317 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 LRTM1Q9HBL6 345 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 PFDN4Q9NQP4 134 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 GIMAP4Q9NUV9 329 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 EML6Q6ZMW3 1958 aa15.51■□□□□ 0.07
UBE3D-208ENST00000626828 NINQ8N4C6 2090 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 DIDO1Q9BTC0 2240 aaKnown RBP15.5■□□□□ 0.07
UBE3D-208ENST00000626828 C2orf92A0A1B0GVN3 265 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 WDR91A4D1P6 747 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 OR6B1O95007 311 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 CT62P0C5K7 136 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 LINC00032P0C843 101 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 DHRS4L1P0CG22 281 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 S1PR1P21453 382 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 SSTR4P31391 388 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 SOX3P41225 446 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 UBAP2LQ14157 1087 aaKnown RBP15.5■□□□□ 0.07
UBE3D-208ENST00000626828 MPP2Q14168 576 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 PRICKLE4Q2TBC4 344 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 SH2D4BQ5SQS7 431 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 FHL5Q5TD97 284 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 HLA-DQA1Q5Y7H0 255 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 MDGA2Q7Z553 956 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 CCDC116Q8IYX3 515 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 LRRC25Q8N386 305 aaPredicted RBP15.5■□□□□ 0.07
UBE3D-208ENST00000626828 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.5■□□□□ 0.07
UBE3D-208ENST00000626828 SLC22A8Q8TCC7 542 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 ZBTB9Q96C00 473 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 CNRIP1Q96F85 164 aaPredicted RBP15.5■□□□□ 0.07
UBE3D-208ENST00000626828 CCT7Q99832 543 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 TUBB1Q9H4B7 451 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 SLC35C2Q9NQQ7 365 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 TAS2R7Q9NYW3 318 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 CFL2Q9Y281 166 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 POLR3HQ9Y535 204 aaPredicted RBP15.5■□□□□ 0.07
UBE3D-208ENST00000626828 MYO7BQ6PIF6 2116 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 LRRK2Q5S007 2527 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 DOPEY2Q9Y3R5 2298 aa15.5■□□□□ 0.07
UBE3D-208ENST00000626828 PEX1O43933 1283 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 BCAS2O75934 225 aaPredicted RBP15.49■□□□□ 0.07
UBE3D-208ENST00000626828 SNUPNO95149 360 aaKnown RBP15.49■□□□□ 0.07
UBE3D-208ENST00000626828 SERPINE1P05121 402 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 DDCP20711 480 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 GRK2P25098 689 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 MPIP34949 423 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 ALDH6A1Q02252 535 aaKnown RBP15.49■□□□□ 0.07
UBE3D-208ENST00000626828 MGAT2Q10469 447 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 KRTCAP3Q53RY4 240 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 FAM71E1Q6IPT2 247 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 FAM111BQ6SJ93 734 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 RTL4Q6ZR62 310 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 SULF2Q8IWU5 870 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 DDIASQ8IXT1 998 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 TAGAPQ8N103 731 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 VWA5B2Q8N398 1253 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 FAM26EQ8N5C1 309 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 ZNF615Q8N8J6 731 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 POGLUT1Q8NBL1 392 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 TWIST2Q8WVJ9 160 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 EXOSC8Q96B26 276 aaKnown RBP15.49■□□□□ 0.07
UBE3D-208ENST00000626828 CTHRC1Q96CG8 243 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 BRINP2Q9C0B6 783 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 WWTR1Q9GZV5 400 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 MYNNQ9NPC7 610 aa15.49■□□□□ 0.07
UBE3D-208ENST00000626828 ZNF639Q9UID6 485 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms