RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 GPR32P1Q8NGA4 272 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 WFDC5Q8TCV5 224 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 UCN3Q969E3 161 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 RSPO3Q9BXY4 272 aaPredicted RBP13.39□□□□□ -0.27
LDB3-209ENST00000623056 FOLH1BQ9HBA9 442 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 TMEM161AQ9NX61 479 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 PHF11Q9UIL8 331 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 POLHQ9Y253 713 aa13.39□□□□□ -0.27
LDB3-209ENST00000623056 TMEM129A0AVI4 362 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 ZNF840PA6NDX5 716 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 PRR23AA6NEV1 266 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 KPNA5O15131 536 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 AKAP8O43823 692 aaKnown RBP13.38□□□□□ -0.27
LDB3-209ENST00000623056 SOD1P00441 154 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 RAF1P04049 648 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 TPOP07202 933 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 NAGAP17050 411 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 CTRB1P17538 263 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 CD79BP40259 229 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 BTG1P62324 171 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 IKZF1Q13422 519 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 KCNC3Q14003 757 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 GPR176Q14439 515 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 SLC25A30Q5SVS4 291 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 BICRALQ6AI39 1079 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 CTRB2Q6GPI1 263 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 TYW3Q6IPR3 259 aaKnown RBP13.38□□□□□ -0.27
LDB3-209ENST00000623056 TMEM65Q6PI78 240 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 CD200R1LQ6Q8B3 271 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 DEF8Q6ZN54 512 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 USP45Q70EL2 814 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 RBM45Q8IUH3 476 aaKnown RBP13.38□□□□□ -0.27
LDB3-209ENST00000623056 ASIC4Q96FT7 647 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 MED28Q9H204 178 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 BRD9Q9H8M2 597 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 ZFP64Q9NPA5 681 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 MRPL39Q9NYK5 338 aaKnown RBP13.38□□□□□ -0.27
LDB3-209ENST00000623056 PCDH10Q9P2E7 1040 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 FAM8A1Q9UBU6 413 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 KCNE2Q9Y6J6 123 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 TRDV1A0A1B0GX56 115 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 SNTNA6NMZ2 147 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 ARHGEF33A8MVX0 844 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 SRPRAP08240 638 aaKnown RBP13.38□□□□□ -0.27
LDB3-209ENST00000623056 SLC6A1P30531 599 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 FLT3LGP49771 235 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 C2orf80Q0P641 193 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 PDE7AQ13946 482 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 GINS1Q14691 196 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 MFSD13AQ14CX5 517 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 POU4F3Q15319 338 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 AGTRAPQ6RW13 159 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 TMEM107Q6UX40 140 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 COMMD6Q7Z4G1 85 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 ESX1Q8N693 406 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 LRRC17Q8N6Y2 441 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 FBXO22Q8NEZ5 403 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 ALG14Q96F25 216 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 MSANTD3Q96H12 275 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 ZSCAN5AQ9BUG6 496 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 HEXA-AS1Q9H8Q6 139 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 ISYNA1Q9NPH2 558 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 EVA1BQ9NVM1 165 aa13.38□□□□□ -0.27
LDB3-209ENST00000623056 SHISA3A0PJX4 238 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 PIPSLA2A3N6 862 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 SOCS5O75159 536 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 MTX2O75431 263 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 SOX18P35713 384 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 SOX9P48436 509 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 DGKGP49619 791 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 ADAM15Q13444 863 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 BCL2L15Q5TBC7 163 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 ACSM5Q6NUN0 579 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 RTN4RL1Q86UN2 441 aaPredicted RBP13.37□□□□□ -0.27
LDB3-209ENST00000623056 COMMD7Q86VX2 200 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 SLC30A8Q8IWU4 369 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 DCAF4L2Q8NA75 395 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 OR11H7Q8NGC8 314 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 FGF11Q92914 225 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 RNFT2Q96EX2 444 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 TEFMQ96QE5 360 aaKnown RBP13.37□□□□□ -0.27
LDB3-209ENST00000623056 B3GNT4Q9C0J1 378 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 HDHD2Q9H0R4 259 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 NT5DC2Q9H857 520 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 FGF20Q9NP95 211 aaPredicted RBP13.37□□□□□ -0.27
LDB3-209ENST00000623056 C12orf4Q9NQ89 552 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 SEMA3GQ9NS98 782 aa13.37□□□□□ -0.27
LDB3-209ENST00000623056 A0A1W2PRB8 838 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 SAP18O00422 153 aaKnown RBP13.36□□□□□ -0.27
LDB3-209ENST00000623056 BCHEP06276 602 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 ACP2P11117 423 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 CYBAP13498 195 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 ATP1B2P14415 290 aaPredicted RBP13.36□□□□□ -0.27
LDB3-209ENST00000623056 ATP12AP54707 1039 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 RPS26P62854 115 aaKnown RBP13.36□□□□□ -0.27
LDB3-209ENST00000623056 PTSQ03393 145 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 PRKCZQ05513 592 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 ZNF267Q14586 743 aaPredicted RBP13.36□□□□□ -0.27
LDB3-209ENST00000623056 SNAPC1Q16533 368 aa13.36□□□□□ -0.27
LDB3-209ENST00000623056 CCSMST1Q4G0I0 132 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms