RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 BNIP2Q12982 314 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 GANABQ14697 944 aaKnown RBP8.59□□□□□ -1.03
HDAC9-229ENST00000622668 C1orf94Q6P1W5 598 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 GRAMD2AQ8IUY3 354 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 OR5T3Q8NGG3 340 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 MAGEE2Q8TD90 523 aaPredicted RBP8.59□□□□□ -1.03
HDAC9-229ENST00000622668 CDCP1Q9H5V8 836 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 C2orf42Q9NWW7 574 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 NPIPA1Q9UND3 350 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 ICKQ9UPZ9 632 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 DHRS12A0PJE2 317 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 NCK1P16333 377 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 ENDOUP21128 410 aaKnown RBP8.59□□□□□ -1.03
HDAC9-229ENST00000622668 MAOAP21397 527 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 MAGEA6P43360 314 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 CSNK1G2P78368 415 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 GAS6Q14393 721 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 PPP1R3AQ16821 1122 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 GALNT18Q6P9A2 607 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 ZNF786Q8N393 782 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 OR6Y1Q8NGX8 325 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 CENPTQ96BT3 561 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 MCM8Q9UJA3 840 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 PILRBQ9UKJ0 227 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 C11orf98E9PRG8 122 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 PRRG2O14669 202 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 CNOT3O75175 753 aaKnown RBP8.59□□□□□ -1.03
HDAC9-229ENST00000622668 STX11O75558 287 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 FARS2O95363 451 aaKnown RBP8.59□□□□□ -1.03
HDAC9-229ENST00000622668 DNAJB13P59910 316 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 ZIK1Q3SY52 487 aaPredicted RBP8.59□□□□□ -1.03
HDAC9-229ENST00000622668 KMT5CQ86Y97 462 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 SLC47A1Q96FL8 570 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 SLC39A3Q9BRY0 314 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 MENTQ9BUN1 341 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 IFT27Q9BW83 186 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 MEAF6Q9HAF1 191 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 ZIM2Q9NZV7 527 aa8.59□□□□□ -1.03
HDAC9-229ENST00000622668 CPSF4LA6NMK7 179 aaKnown RBP8.58□□□□□ -1.04
HDAC9-229ENST00000622668 FAM166BA8MTA8 275 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 TARM1B6A8C7 271 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 TRIM23P36406 574 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 EIF1AXP47813 144 aaKnown RBP8.58□□□□□ -1.04
HDAC9-229ENST00000622668 CDC42P60953 191 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 REP15Q6BDI9 236 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 TTC33Q6PID6 262 aaPredicted RBP8.58□□□□□ -1.04
HDAC9-229ENST00000622668 WDR53Q7Z5U6 358 aaPredicted RBP8.58□□□□□ -1.04
HDAC9-229ENST00000622668 SPPL2CQ8IUH8 684 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 CRIPAKQ8N1N5 446 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 DEPDC4Q8N2C3 294 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 OR52R1Q8NGF1 315 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 OR6K6Q8NGW6 343 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 MOAP1Q96BY2 351 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 CGREF1Q99674 301 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 MAPKAP1Q9BPZ7 522 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 NRSN2Q9GZP1 204 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 IGSF5Q9NSI5 407 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 ZNF624Q9P2J8 865 aaPredicted RBP8.58□□□□□ -1.04
HDAC9-229ENST00000622668 B3GALT1Q9Y5Z6 326 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 PTPRQQ9UMZ3 2332 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 TNFRSF11BO00300 401 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 UGDHO60701 494 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 SLC6A9P48067 706 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 CLK1P49759 484 aaKnown RBP8.58□□□□□ -1.04
HDAC9-229ENST00000622668 HSF2Q03933 536 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 PLP2Q04941 152 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 GRB7Q14451 532 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 TMPPEQ6ZT21 453 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 SPRED1Q7Z699 444 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 ZNF605Q86T29 641 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 FAM156AQ8NDB6 213 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 TOR1AIP2Q8NFQ8 470 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 OR14A16Q8NHC5 309 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 ZCCHC14Q8WYQ9 949 aaKnown RBP8.58□□□□□ -1.04
HDAC9-229ENST00000622668 PNPLA2Q96AD5 504 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 OR51V1Q9H2C8 321 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 BRD7Q9NPI1 651 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 CENPMQ9NSP4 180 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 ACACBO00763 2458 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 PSIP1O75475 530 aaKnown RBP8.58□□□□□ -1.04
HDAC9-229ENST00000622668 PABPC4LP0CB38 370 aaKnown RBP8.58□□□□□ -1.04
HDAC9-229ENST00000622668 POU3F2P20265 443 aaPredicted RBP8.58□□□□□ -1.04
HDAC9-229ENST00000622668 GABRB3P28472 473 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 RAB38P57729 211 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 SLC5A12Q1EHB4 618 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 ZNF550Q7Z398 422 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 BIRC8Q96P09 236 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 MCHR1Q99705 422 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 OR51I1Q9H343 314 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 SAR1AQ9NR31 198 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 MCTS1Q9ULC4 181 aaKnown RBP8.58□□□□□ -1.04
HDAC9-229ENST00000622668 AP4S1Q9Y587 144 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 PSME4Q14997 1843 aa8.58□□□□□ -1.04
HDAC9-229ENST00000622668 LOC105369274A0A096LPK9 316 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 LOC102723532A0A0G2JNH3 316 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 RIIAD1A6NNX1 92 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 CXCR6O00574 342 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 PPP6CO00743 305 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 SPINT1O43278 529 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 LAMP1P11279 417 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms