RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 HEXBP07686 556 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 ADORA3P0DMS8 318 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 UGT1A4P22310 534 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 IL4RP24394 825 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 MATKP42679 507 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 ACAA2P42765 397 aaKnown RBP4.08□□□□□ -1.76
CPNE3-213ENST00000622183 SLC1A6P48664 564 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 FKBP3Q00688 224 aaKnown RBP4.08□□□□□ -1.76
CPNE3-213ENST00000622183 PDZK1IP1Q13113 114 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 FASTKQ14296 549 aaKnown RBP4.08□□□□□ -1.76
CPNE3-213ENST00000622183 NCAPD2Q15021 1401 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 SHROOM1Q2M3G4 852 aaPredicted RBP4.08□□□□□ -1.76
CPNE3-213ENST00000622183 MS4A18Q3C1V0 323 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 ACSF3Q4G176 576 aaPredicted RBP4.08□□□□□ -1.76
CPNE3-213ENST00000622183 ARSKQ6UWY0 536 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 BCORP1Q8N888 145 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 WDSUB1Q8N9V3 476 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 ZNF397Q8NF99 534 aaPredicted RBP4.08□□□□□ -1.76
CPNE3-213ENST00000622183 OR1K1Q8NGR3 316 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 OR4F5Q8NH21 305 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 FBXO25Q8TCJ0 367 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 CHPT1Q8WUD6 406 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 GTF3AQ92664 365 aaKnown RBP4.08□□□□□ -1.76
CPNE3-213ENST00000622183 CCDC51Q96ER9 411 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 RCHY1Q96PM5 261 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 WRAP53Q9BUR4 548 aaKnown RBP4.08□□□□□ -1.76
CPNE3-213ENST00000622183 RAB11FIP5Q9BXF6 653 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 KRTAP1-5Q9BYS1 174 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 RWDD1Q9H446 243 aaPredicted RBP4.08□□□□□ -1.76
CPNE3-213ENST00000622183 STARD5Q9NSY2 213 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 DEPPQ9NTK1 212 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 TXLNGQ9NUQ3 528 aa4.08□□□□□ -1.76
CPNE3-213ENST00000622183 THAP10Q9P2Z0 257 aaPredicted RBP4.08□□□□□ -1.76
CPNE3-213ENST00000622183 AFF2P51816 1311 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 ARHGEF33A8MVX0 844 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 LGALS8O00214 317 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 ZNF749O43361 778 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 IDH3BO43837 385 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 SNAP91O60641 907 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 FRAT2O75474 233 aaPredicted RBP4.07□□□□□ -1.76
CPNE3-213ENST00000622183 DIRAS3O95661 229 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 SRPXP78539 464 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 NFATC2Q13469 925 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 LY6DQ14210 128 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 ZNF146Q15072 292 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 ADAM5Q6NVV9 412 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 DPY19L2P2Q6ZN68 376 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 GOLGA7Q7Z5G4 137 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 PRSS33Q8NF86 280 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 OR52B4Q8NGK2 314 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 NABP1Q96AH0 204 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 POM121L2Q96KW2 1035 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 PRICKLE1Q96MT3 831 aaPredicted RBP4.07□□□□□ -1.76
CPNE3-213ENST00000622183 DPH5Q9H2P9 285 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 MOB1AQ9H8S9 216 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 ACTR8Q9H981 624 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 Q9HAA7 133 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 SH3BGRL2Q9UJC5 107 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 MGAT4BQ9UQ53 548 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 AP1M2Q9Y6Q5 423 aa4.07□□□□□ -1.76
CPNE3-213ENST00000622183 ABCC4O15439 1325 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 A0A087WZY1 265 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 FAM230AA0A1W2PPH8 454 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 BCLAF3A2AJT9 711 aaKnown RBP4.06□□□□□ -1.76
CPNE3-213ENST00000622183 IGLON5A6NGN9 336 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 E9PMD0 336 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 K7EQG2 157 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 SGK494L7N484 410 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 NDC80O14777 642 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 CLDN3O15551 220 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 NOL3O60936 208 aaKnown RBP4.06□□□□□ -1.76
CPNE3-213ENST00000622183 DUSP11O75319 330 aaKnown RBP4.06□□□□□ -1.76
CPNE3-213ENST00000622183 SCGB2A1O75556 95 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 STK17BO94768 372 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 NDUFA7O95182 113 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 APBB3O95704 486 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 AK1P00568 194 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 HPRP00739 348 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 IGHG1P01857 330 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 TRIM49P0CI25 452 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 TRIM49CP0CI26 452 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 NCF1P14598 390 aaPredicted RBP4.06□□□□□ -1.76
CPNE3-213ENST00000622183 CYP11B1P15538 503 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 CALRP27797 417 aaKnown RBP4.06□□□□□ -1.76
CPNE3-213ENST00000622183 MDH1P40925 334 aaKnown RBP4.06□□□□□ -1.76
CPNE3-213ENST00000622183 MTTPP55157 894 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 HILS1P60008 231 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 NAAAQ02083 359 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 ENPP2Q13822 863 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 ZNF699Q32M78 642 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 LRIT3Q3SXY7 679 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 MUC21Q5SSG8 566 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 ZC2HC1BQ5TFG8 222 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 PAQR9Q6ZVX9 377 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 VPS36Q86VN1 386 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 RANBP3LQ86VV4 465 aaPredicted RBP4.06□□□□□ -1.76
CPNE3-213ENST00000622183 GPBP1Q86WP2 473 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 LMNTD2Q8IXW0 634 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 ZNF781Q8N8C0 355 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 BANPQ8N9N5 519 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms