RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 XKR8Q9H6D3 395 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 CENPMQ9NSP4 180 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 SPASTQ9UBP0 616 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 ITGA11Q9UKX5 1188 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 CCPG1Q9ULG6 757 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 CLEC4AQ9UMR7 237 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 TDRKHQ9Y2W6 561 aaKnown RBP3.32□□□□□ -1.88
BRCA1-229ENST00000621897 NAALAD2Q9Y3Q0 740 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 MAP3K19Q56UN5 1328 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 TNIKQ9UKE5 1360 aa3.32□□□□□ -1.88
BRCA1-229ENST00000621897 KIF16BQ96L93 1317 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 LOC100653049A0A140TA62 436 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 NDUFS8O00217 210 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 PDHXO00330 501 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 ERLIN1O75477 346 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 AKAP3O75969 853 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 KRT34O76011 436 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 AKR7A3O95154 331 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 PRAMEF12O95522 483 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 FGFR1OPO95684 399 aaKnown RBP3.31□□□□□ -1.88
BRCA1-229ENST00000621897 RENP00797 406 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 PDGFBP01127 241 aaPredicted RBP3.31□□□□□ -1.88
BRCA1-229ENST00000621897 PENKP01210 267 aaPredicted RBP3.31□□□□□ -1.88
BRCA1-229ENST00000621897 KRT6BP04259 564 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 S100A6P06703 90 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 TPM3P06753 285 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 ADORA3P0DMS8 318 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 DLATP10515 647 aaKnown RBP3.31□□□□□ -1.88
BRCA1-229ENST00000621897 NCF1P14598 390 aaPredicted RBP3.31□□□□□ -1.88
BRCA1-229ENST00000621897 EPORP19235 508 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 KRT6CP48668 564 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 RGS7P49802 495 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 NME5P56597 212 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 SRPXP78539 464 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 IL24Q13007 206 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 DOC2AQ14183 400 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 C3AR1Q16581 482 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 CLPPQ16740 277 aaPredicted RBP3.31□□□□□ -1.88
BRCA1-229ENST00000621897 CFAP221Q4G0U5 840 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 ZNF789Q5FWF6 425 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 C9orf66Q5T8R8 295 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 ATAD3BQ5T9A4 648 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 AP1ARQ63HQ0 302 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 LEMD1Q68G75 181 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 MOXD1Q6UVY6 613 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 KCTD9Q7L273 389 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 ARMCX2Q7L311 632 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 NRARPQ7Z6K4 114 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 PRUNE1Q86TP1 453 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 VASH2Q86V25 355 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 LINC00469Q8N7U9 141 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 OR5M9Q8NGP3 310 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 ST7LQ8TDW4 575 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 C14orf79Q96F83 325 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 LURAP1Q96LR2 239 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 TAAR6Q96RI8 345 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 IL12RB2Q99665 862 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 BCL7BQ9BQE9 202 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 PAPOLGQ9BWT3 736 aaKnown RBP3.31□□□□□ -1.88
BRCA1-229ENST00000621897 CACNG6Q9BXT2 260 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 POLR1EQ9GZS1 481 aaKnown RBP3.31□□□□□ -1.88
BRCA1-229ENST00000621897 TMEM206Q9H813 350 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 GORASP2Q9H8Y8 452 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 LRRC40Q9H9A6 602 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 SYTL2Q9HCH5 934 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 ABCB10Q9NRK6 738 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 FAM114A2Q9NRY5 505 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.31□□□□□ -1.88
BRCA1-229ENST00000621897 TRPC4Q9UBN4 977 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 STX8Q9UNK0 236 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 TEX264Q9Y6I9 313 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 DDX49Q9Y6V7 483 aaKnown RBP3.31□□□□□ -1.88
BRCA1-229ENST00000621897 U3KQV3 271 aa3.31□□□□□ -1.88
BRCA1-229ENST00000621897 DHX29Q7Z478 1369 aaKnown RBP3.3□□□□□ -1.88
BRCA1-229ENST00000621897 PLEKHG2Q9H7P9 1386 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 CENPJQ9HC77 1338 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-229ENST00000621897 IGHV3-16A0A0C4DH30 117 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 TRBV2A0A0J9YWF9 115 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 A0A1W2PPW3 197 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 NCF1BA6NI72 391 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-229ENST00000621897 NKX6-3A6NJ46 265 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 RPL37AP8A6NKH3 93 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 NCF1CA8MVU1 366 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-229ENST00000621897 H0Y8G0 127 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 MAPK13O15264 365 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 CLDN3O15551 220 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 TNFSF12O43508 249 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 IDH1O75874 414 aaKnown RBP3.3□□□□□ -1.88
BRCA1-229ENST00000621897 PTBP3O95758 552 aaKnown RBP3.3□□□□□ -1.88
BRCA1-229ENST00000621897 TGFAP01135 160 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 NPPAP01160 153 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 GBAP04062 536 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 CCDC130P13994 396 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 DNAJB1P25685 340 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 GIFP27352 417 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 CCR1P32246 355 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 CHRNA3P32297 505 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 TAGLN2P37802 199 aaKnown RBP3.3□□□□□ -1.88
BRCA1-229ENST00000621897 NAGLUP54802 743 aa3.3□□□□□ -1.88
BRCA1-229ENST00000621897 PRRX1P54821 245 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms