RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 TMEM120BA0PK00 339 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 KIR3DP1A8MWS1 328 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 TFECO14948 347 aaPredicted RBP16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 DYRK3O43781 588 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 TYROBPO43914 113 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 HS6ST1O60243 411 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 OR10H2O60403 315 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 NR0B1P51843 470 aaKnown RBP16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 CASP6P55212 293 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 MPEG1Q2M385 716 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 SPRED3Q2MJR0 410 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 CMPK2Q5EBM0 449 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 TCHHL1Q5QJ38 904 aaPredicted RBP16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 CCNYL2Q5T2Q4 361 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 OR52E8Q6IFG1 317 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 NUDCD3Q8IVD9 361 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 ARFGAP2Q8N6H7 521 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 CCNYL1Q8N7R7 359 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 NUBPLQ8TB37 319 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 DYDC1Q8WWB3 177 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 RIT1Q92963 219 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 HBEGFQ99075 208 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 PELOQ9BRX2 385 aaKnown RBP16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 SUCOQ9UBS9 1254 aaKnown RBP16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 TRPS1Q9UHF7 1281 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 SNX6Q9UNH7 406 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 STK38LQ9Y2H1 464 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 TEX15Q9BXT5 2789 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 NINQ8N4C6 2090 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 G3V3Y1 287 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 CLPSP04118 112 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 SLC35E2P0CK97 266 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 CREB1P16220 341 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 IMPDH1P20839 514 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 GALNT1Q10472 559 aaPredicted RBP16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 TBL3Q12788 808 aaKnown RBP16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 NDUFAF5Q5TEU4 345 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 OPN5Q6U736 354 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 RTL4Q6ZR62 310 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 PAGE2Q7Z2X7 111 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 COMMD6Q7Z4G1 85 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 CDYL2Q8N8U2 506 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 OR2M7Q8NG81 312 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 OR52N2Q8NGI0 321 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 MGARPQ8TDB4 240 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 ART5Q96L15 291 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 BRF2Q9HAW0 419 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 SLC17A7Q9P2U7 560 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 EMCNQ9ULC0 261 aa16.6■□□□□ 0.25
SCAMP4-213ENST00000621748 NADKO95544 446 aaPredicted RBP16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 ABOP16442 354 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 CNR1P21554 472 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 PIK3R1P27986 724 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 GALNSP34059 522 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 MAPK12P53778 367 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 SLC18A1P54219 525 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 SLC37A1P57057 533 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 PPP2R2AP63151 447 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 ADORA2A-AS1P86434 159 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 ZNF791Q3KP31 576 aaPredicted RBP16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 TTMPQ5BVD1 217 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 LIPMQ5VYY2 423 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 MTFR2Q6P444 385 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 LYPD8Q6UX82 237 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 BNC2Q6ZN30 1099 aaPredicted RBP16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 MRGPRGQ86SM5 289 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 DOLPP1Q86YN1 238 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 TRIM42Q8IWZ5 723 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 OR4K14Q8NGD5 310 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 SGCZQ96LD1 299 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 ZNF382Q96SR6 550 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 CXorf21Q9HAI6 301 aa16.59■□□□□ 0.25
SCAMP4-213ENST00000621748 A0A1B0GTH9 108 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 MANBAO00462 879 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 BIRC5O15392 142 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 CDC40O60508 579 aaKnown RBP eCLIP16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 TRIM13O60858 407 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 PDE9AO76083 593 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 CT62P0C5K7 136 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 CCL3P10147 92 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 ESRRAP11474 423 aaPredicted RBP16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 CHN1P15882 459 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 SSTR4P31391 388 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 XKP51811 444 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 DNAJB13P59910 316 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 RNF111Q6ZNA4 994 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 GPRIN3Q6ZVF9 776 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 MMP21Q8N119 569 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 C1orf52Q8N6N3 182 aaKnown RBP16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 GOLM1Q8NBJ4 401 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 AGAP11Q8TF27 550 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 TM4SF18Q96CE8 201 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 L3HYPDHQ96EM0 354 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 PHF12Q96QT6 1004 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 WWTR1Q9GZV5 400 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 DEFB127Q9H1M4 99 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 C12orf65Q9H3J6 166 aaKnown RBP16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 OXSMQ9NWU1 459 aa16.58■□□□□ 0.24
SCAMP4-213ENST00000621748 VPS29Q9UBQ0 182 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms