RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 EPGNQ6UW88 154 aa17.29■□□□□ 0.36
CIRBP-245ENST00000621399 SPATA19Q7Z5L4 167 aa17.29■□□□□ 0.36
CIRBP-245ENST00000621399 RPS19BP1Q86WX3 136 aaKnown RBP17.29■□□□□ 0.36
CIRBP-245ENST00000621399 ADCY4Q8NFM4 1077 aa17.29■□□□□ 0.36
CIRBP-245ENST00000621399 ACTRT2Q8TDY3 377 aa17.29■□□□□ 0.36
CIRBP-245ENST00000621399 THAP3Q8WTV1 239 aaPredicted RBP17.29■□□□□ 0.36
CIRBP-245ENST00000621399 MTERF3Q96E29 417 aa17.29■□□□□ 0.36
CIRBP-245ENST00000621399 MAELQ96JY0 434 aaKnown RBP17.29■□□□□ 0.36
CIRBP-245ENST00000621399 ZNF354BQ96LW1 612 aa17.29■□□□□ 0.36
CIRBP-245ENST00000621399 LMF1Q96S06 567 aa17.29■□□□□ 0.36
CIRBP-245ENST00000621399 BRINP2Q9C0B6 783 aa17.29■□□□□ 0.36
CIRBP-245ENST00000621399 SEMA4CQ9C0C4 833 aa17.29■□□□□ 0.36
CIRBP-245ENST00000621399 CDCP1Q9H5V8 836 aa17.29■□□□□ 0.36
CIRBP-245ENST00000621399 ZBTB20Q9HC78 741 aaPredicted RBP17.29■□□□□ 0.36
CIRBP-245ENST00000621399 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.29■□□□□ 0.36
CIRBP-245ENST00000621399 ZNF223Q9UK11 482 aaPredicted RBP17.29■□□□□ 0.36
CIRBP-245ENST00000621399 GABRR3A8MPY1 467 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 MYO1GB0I1T2 1018 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 SCAMP2O15127 329 aaKnown RBP17.28■□□□□ 0.36
CIRBP-245ENST00000621399 TBX19O60806 448 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 EDF1O60869 148 aaKnown RBP17.28■□□□□ 0.36
CIRBP-245ENST00000621399 IGKV3-11P04433 115 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 CT62P0C5K7 136 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 PRPS1L1P21108 318 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 NTSP30990 170 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 NCBP2P52298 156 aaKnown RBP eCLIP17.28■□□□□ 0.36
CIRBP-245ENST00000621399 AQP5P55064 265 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 MAP4K2Q12851 820 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 PDE7AQ13946 482 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 LTB4RQ15722 352 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 CEBPEQ15744 281 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 MEP1AQ16819 746 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 PRICKLE4Q2TBC4 344 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 FAM111BQ6SJ93 734 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 FAM9CQ8IZT9 166 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 VWA5B2Q8N398 1253 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 ZADH2Q8N4Q0 377 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 KRTCAP2Q8N6L1 136 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 ZNF764Q96H86 408 aaPredicted RBP17.28■□□□□ 0.36
CIRBP-245ENST00000621399 PRPF18Q99633 342 aaKnown RBP17.28■□□□□ 0.36
CIRBP-245ENST00000621399 ATP6V1HQ9UI12 483 aa17.28■□□□□ 0.36
CIRBP-245ENST00000621399 PDPK1O15530 556 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 DPM1O60762 260 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 SSTR4P31391 388 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 MDH1P40925 334 aaKnown RBP17.27■□□□□ 0.36
CIRBP-245ENST00000621399 IDH3AP50213 366 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 CLDN8P56748 225 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 RNF4P78317 190 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 MGAT2Q10469 447 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 FUT7Q11130 342 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 CPTPQ5TA50 214 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 IGFL2Q6UWQ7 119 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 IGFL3Q6UXB1 125 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 RNF111Q6ZNA4 994 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 ACAD11Q709F0 780 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 HPS6Q86YV9 775 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 OR5L2Q8NGL0 311 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 OR9A2Q8NGT5 310 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 OR8K3Q8NH51 312 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 CEP70Q8NHQ1 597 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 SUN3Q8TAQ9 357 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 OR52B2Q96RD2 323 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 NPAS2Q99743 824 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 MAT2BQ9NZL9 334 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 ABI3Q9P2A4 366 aa17.27■□□□□ 0.36
CIRBP-245ENST00000621399 PRKNO60260 465 aaPredicted RBP17.26■□□□□ 0.35
CIRBP-245ENST00000621399 MAN1A2O60476 641 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 VIMP08670 466 aaKnown RBP17.26■□□□□ 0.35
CIRBP-245ENST00000621399 ALDOCP09972 364 aaKnown RBP17.26■□□□□ 0.35
CIRBP-245ENST00000621399 SLC37A1P57057 533 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 MRPS35P82673 323 aaKnown RBP17.26■□□□□ 0.35
CIRBP-245ENST00000621399 TRMT12Q53H54 448 aaKnown RBP17.26■□□□□ 0.35
CIRBP-245ENST00000621399 SOWAHCQ53LP3 525 aaPredicted RBP17.26■□□□□ 0.35
CIRBP-245ENST00000621399 ZNF385BQ569K4 471 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 ZNF628Q5EBL2 1059 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 RIMKLAQ8IXN7 391 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 LGI4Q8N135 537 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 BEST3Q8N1M1 668 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 OR7G1Q8NGA0 311 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 OR7A2PQ8NGA2 310 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 NUDT8Q8WV74 236 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 KAT2AQ92830 837 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 CIDECQ96AQ7 238 aaPredicted RBP17.26■□□□□ 0.35
CIRBP-245ENST00000621399 THOC1Q96FV9 657 aaKnown RBP17.26■□□□□ 0.35
CIRBP-245ENST00000621399 AMDHD1Q96NU7 426 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 DPY30Q9C005 99 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 GLIPR2Q9H4G4 154 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 LIN28AQ9H9Z2 209 aaKnown RBP17.26■□□□□ 0.35
CIRBP-245ENST00000621399 ATAD3AQ9NVI7 634 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 AIG1Q9NVV5 245 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 PLA2G3Q9NZ20 509 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 BCAP29Q9UHQ4 241 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 MAPRE3Q9UPY8 281 aa17.26■□□□□ 0.35
CIRBP-245ENST00000621399 DYTNA2CJ06 578 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 EIF4E1BA6NMX2 242 aaKnown RBP17.25■□□□□ 0.35
CIRBP-245ENST00000621399 FCHO1O14526 889 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 POLR3GO15318 223 aaPredicted RBP17.25■□□□□ 0.35
CIRBP-245ENST00000621399 WDPCPO95876 746 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 F10P00742 488 aa17.25■□□□□ 0.35
CIRBP-245ENST00000621399 LAMP1P11279 417 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms