RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 ARF6P62330 175 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 RPS24P62847 133 aaKnown RBP2.95□□□□□ -1.94
NEB-220ENST00000618972 CLDN10P78369 228 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 DUSP6Q16828 381 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 MAJINQ3KP22 176 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 LEXMQ3ZCV2 418 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 ALG10BQ5I7T1 473 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 KRBOX4Q5JUW0 171 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 VASH1Q7L8A9 365 aaPredicted RBP2.95□□□□□ -1.94
NEB-220ENST00000618972 RTN4RL1Q86UN2 441 aaPredicted RBP2.95□□□□□ -1.94
NEB-220ENST00000618972 RASGRP3Q8IV61 690 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 NAGSQ8N159 534 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 C1orf52Q8N6N3 182 aaKnown RBP2.95□□□□□ -1.94
NEB-220ENST00000618972 PTGR2Q8N8N7 351 aaPredicted RBP2.95□□□□□ -1.94
NEB-220ENST00000618972 ZNF527Q8NB42 609 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 UFD1Q92890 307 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 WNT8BQ93098 351 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 IGSF8Q969P0 613 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 CCM2Q9BSQ5 444 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 DOHHQ9BU89 302 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 TMEM185BQ9H7F4 350 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 MBD1Q9UIS9 605 aaPredicted RBP2.95□□□□□ -1.94
NEB-220ENST00000618972 COPS3Q9UNS2 423 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 BTBD17A6NE02 478 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 METTL15A6NJ78 407 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 GABRR3A8MPY1 467 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 MSCO60682 206 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 GBAP04062 536 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 IGFBP5P24593 272 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 PTPN6P29350 595 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 PTGER3P43115 390 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 SOX9P48436 509 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 MTPNP58546 118 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 TTLQ8NG68 377 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 MACROD1Q9BQ69 325 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 TAS2R16Q9NYV7 291 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 OR10H3O60404 316 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 SRP9P49458 86 aaKnown RBP2.95□□□□□ -1.94
NEB-220ENST00000618972 ZNF41P51814 821 aaPredicted RBP2.95□□□□□ -1.94
NEB-220ENST00000618972 ASAH1Q13510 395 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 C21orf62-AS1Q17RA5 79 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 CYB5R2Q6BCY4 276 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 ADGRG5Q8IZF4 528 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 WACQ9BTA9 647 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 C13orf42A0A1B0GVH6 325 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 RPA4Q13156 261 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 FGFBP1Q14512 234 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 PARP15Q460N3 678 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 ZBTB37Q5TC79 503 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 MBOAT1Q6ZNC8 495 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 SERPINA12Q8IW75 414 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 OR5AP2Q8NGF4 316 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 SLC7A6Q92536 515 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 SLC35B4Q969S0 331 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 ZNF587Q96SQ5 575 aaPredicted RBP2.95□□□□□ -1.94
NEB-220ENST00000618972 RBCK1Q9BYM8 510 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 BCO1Q9HAY6 547 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 RAI2Q9Y5P3 530 aa2.95□□□□□ -1.94
NEB-220ENST00000618972 F5H0A9 414 aaPredicted RBP2.94□□□□□ -1.94
NEB-220ENST00000618972 TLR4O00206 839 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 GABREP78334 506 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 SP140Q13342 867 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 PXDC1Q5TGL8 231 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 ETV3LQ6ZN32 361 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 DET1Q7L5Y6 550 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 FAM122BQ7Z309 247 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 CXXC1Q9P0U4 656 aaPredicted RBP2.94□□□□□ -1.94
NEB-220ENST00000618972 LRFN2Q9ULH4 789 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 GLYATL1P3A0A0U1RQE8 302 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 TMEM200CA6NKL6 621 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 GTPBP1O00178 669 aaKnown RBP2.94□□□□□ -1.94
NEB-220ENST00000618972 ECI2O75521 394 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 HRH2P25021 359 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 EVI2BP34910 448 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 IFITM2Q01629 132 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 PCDH1Q08174 1060 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 Q5BKY6 102 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 VN1R5Q7Z5H4 357 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 APOBEC3FQ8IUX4 373 aaKnown RBP2.94□□□□□ -1.94
NEB-220ENST00000618972 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.94□□□□□ -1.94
NEB-220ENST00000618972 INTS12Q96CB8 462 aaKnown RBP2.94□□□□□ -1.94
NEB-220ENST00000618972 GAR1Q9NY12 217 aaKnown RBP2.94□□□□□ -1.94
NEB-220ENST00000618972 C2orf78A6NCI8 922 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 SNRPGP15A8MWD9 76 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 SYT6Q5T7P8 510 aaPredicted RBP2.94□□□□□ -1.94
NEB-220ENST00000618972 GPR155Q7Z3F1 870 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 LRTM1Q9HBL6 345 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 ATP13A2Q9NQ11 1180 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 OAZ3Q9UMX2 235 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 PEG3Q9GZU2 1588 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 MYH2Q9UKX2 1941 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 SLC10A3P09131 477 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 RAC2P15153 192 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 ACSM2AQ08AH3 577 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 ACSM2BQ68CK6 577 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 CADM3Q8N126 398 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 CNIH3Q8TBE1 160 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 CD300LFQ8TDQ1 290 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 TXNDC15Q96J42 360 aa2.94□□□□□ -1.94
NEB-220ENST00000618972 RIPOR3Q96MK2 946 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms