RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 IL3P08700 152 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 CSNK2A2P19784 350 aaPredicted RBP23.05■■□□□ 1.28
PMS1-220ENST00000618056 PRPH2P23942 346 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 SERPINB5P36952 375 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 BTKQ06187 659 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 PIGGQ5H8A4 983 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 CEP85LQ5SZL2 805 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 OPN5Q6U736 354 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 SLC29A4Q7RTT9 530 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 MDGA2Q7Z553 956 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.05■■□□□ 1.28
PMS1-220ENST00000618056 DOK4Q8TEW6 326 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 C16orf78Q8WTQ4 265 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 SREK1Q8WXA9 508 aaKnown RBP23.05■■□□□ 1.28
PMS1-220ENST00000618056 KLHL29Q96CT2 875 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 CCL27Q9Y4X3 112 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 DNAJC13O75165 2243 aa23.04■■□□□ 1.28
PMS1-220ENST00000618056 EXPH5Q8NEV8 1989 aa23.04■■□□□ 1.28
PMS1-220ENST00000618056 ZNF354AO60765 605 aaPredicted RBP23.04■■□□□ 1.28
PMS1-220ENST00000618056 BPGMP07738 259 aa23.04■■□□□ 1.28
PMS1-220ENST00000618056 CT62P0C5K7 136 aa23.04■■□□□ 1.28
PMS1-220ENST00000618056 ALDH9A1P49189 494 aa23.04■■□□□ 1.28
PMS1-220ENST00000618056 ZNF763Q0D2J5 394 aa23.04■■□□□ 1.28
PMS1-220ENST00000618056 HEPACAMQ14CZ8 416 aa23.04■■□□□ 1.28
PMS1-220ENST00000618056 EBPQ15125 230 aaKnown RBP23.04■■□□□ 1.28
PMS1-220ENST00000618056 ZNF750Q32MQ0 723 aa23.04■■□□□ 1.28
PMS1-220ENST00000618056 KANK2Q63ZY3 851 aa23.04■■□□□ 1.28
PMS1-220ENST00000618056 IL20RBQ6UXL0 311 aa23.04■■□□□ 1.28
PMS1-220ENST00000618056 EXOC3L1Q86VI1 746 aa23.04■■□□□ 1.28
PMS1-220ENST00000618056 SLC15A4Q8N697 577 aa23.04■■□□□ 1.28
PMS1-220ENST00000618056 POGLUT1Q8NBL1 392 aa23.04■■□□□ 1.28
PMS1-220ENST00000618056 PSD4Q8NDX1 1056 aa23.04■■□□□ 1.28
PMS1-220ENST00000618056 ZNF681Q96N22 645 aa23.04■■□□□ 1.28
PMS1-220ENST00000618056 WWTR1Q9GZV5 400 aa23.04■■□□□ 1.28
PMS1-220ENST00000618056 EML4Q9HC35 981 aaKnown RBP23.04■■□□□ 1.28
PMS1-220ENST00000618056 ZNF407Q9C0G0 2248 aa23.03■■□□□ 1.28
PMS1-220ENST00000618056 NINQ8N4C6 2090 aa23.03■■□□□ 1.28
PMS1-220ENST00000618056 KLRC4-KLRK1H3BQV0 150 aa23.03■■□□□ 1.28
PMS1-220ENST00000618056 SEMA7AO75326 666 aa23.03■■□□□ 1.28
PMS1-220ENST00000618056 AGFG2O95081 481 aa23.03■■□□□ 1.28
PMS1-220ENST00000618056 ANXA4P09525 319 aaPredicted RBP23.03■■□□□ 1.28
PMS1-220ENST00000618056 NT5EP21589 574 aa23.03■■□□□ 1.28
PMS1-220ENST00000618056 ARL13AQ5H913 290 aaPredicted RBP23.03■■□□□ 1.28
PMS1-220ENST00000618056 C6orf163Q5TEZ5 329 aa23.03■■□□□ 1.28
PMS1-220ENST00000618056 LRIG3Q6UXM1 1119 aa23.03■■□□□ 1.28
PMS1-220ENST00000618056 GOLM1Q8NBJ4 401 aa23.03■■□□□ 1.28
PMS1-220ENST00000618056 OR6Y1Q8NGX8 325 aa23.03■■□□□ 1.28
PMS1-220ENST00000618056 CNRIP1Q96F85 164 aaPredicted RBP23.03■■□□□ 1.28
PMS1-220ENST00000618056 PGM2Q96G03 612 aa23.03■■□□□ 1.28
PMS1-220ENST00000618056 SGCZQ96LD1 299 aa23.03■■□□□ 1.28
PMS1-220ENST00000618056 ZNF446Q9NWS9 450 aa23.03■■□□□ 1.28
PMS1-220ENST00000618056 EHD3Q9NZN3 535 aa23.03■■□□□ 1.28
PMS1-220ENST00000618056 UTS2RQ9UKP6 389 aa23.03■■□□□ 1.28
PMS1-220ENST00000618056 WBP11Q9Y2W2 641 aaKnown RBP23.03■■□□□ 1.28
PMS1-220ENST00000618056 ZNF780BQ9Y6R6 833 aa23.03■■□□□ 1.28
PMS1-220ENST00000618056 UTP20O75691 2785 aaKnown RBP23.02■■□□□ 1.28
PMS1-220ENST00000618056 SLC28A1O00337 649 aa23.02■■□□□ 1.28
PMS1-220ENST00000618056 CHRNGP07510 517 aa23.02■■□□□ 1.28
PMS1-220ENST00000618056 SSTR4P31391 388 aa23.02■■□□□ 1.28
PMS1-220ENST00000618056 FEN1P39748 380 aaKnown RBP23.02■■□□□ 1.28
PMS1-220ENST00000618056 ALDH6A1Q02252 535 aaKnown RBP23.02■■□□□ 1.28
PMS1-220ENST00000618056 MAP4K2Q12851 820 aa23.02■■□□□ 1.28
PMS1-220ENST00000618056 PRICKLE4Q2TBC4 344 aa23.02■■□□□ 1.28
PMS1-220ENST00000618056 SULF2Q8IWU5 870 aa23.02■■□□□ 1.28
PMS1-220ENST00000618056 SAMD14Q8IZD0 417 aaPredicted RBP23.02■■□□□ 1.28
PMS1-220ENST00000618056 CPSF7Q8N684 471 aaKnown RBP23.02■■□□□ 1.28
PMS1-220ENST00000618056 ZNF615Q8N8J6 731 aa23.02■■□□□ 1.28
PMS1-220ENST00000618056 OR7G1Q8NGA0 311 aa23.02■■□□□ 1.28
PMS1-220ENST00000618056 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.02■■□□□ 1.28
PMS1-220ENST00000618056 SLC22A8Q8TCC7 542 aa23.02■■□□□ 1.28
PMS1-220ENST00000618056 EBPLQ9BY08 206 aa23.02■■□□□ 1.28
PMS1-220ENST00000618056 SEC14L3Q9UDX4 400 aa23.02■■□□□ 1.28
PMS1-220ENST00000618056 ACTL7BQ9Y614 415 aa23.02■■□□□ 1.28
PMS1-220ENST00000618056 PCNX1Q96RV3 2341 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 RGS14O43566 566 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 PEX1O43933 1283 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 NADKO95544 446 aaPredicted RBP23.01■■□□□ 1.27
PMS1-220ENST00000618056 CHEK2O96017 543 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 NEFHP12036 1026 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 S1PR1P21453 382 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 SRSF11Q05519 484 aaKnown RBP23.01■■□□□ 1.27
PMS1-220ENST00000618056 MGAT2Q10469 447 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 KIAA0040Q15053 153 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 KRTCAP3Q53RY4 240 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 GFRALQ6UXV0 394 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 RTL4Q6ZR62 310 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 ZCCHC23Q6ZST2 131 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 SIAH3Q8IW03 269 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 LRRC25Q8N386 305 aaPredicted RBP23.01■■□□□ 1.27
PMS1-220ENST00000618056 VWA5B2Q8N398 1253 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 ZNF441Q8N8Z8 693 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 CTHRC1Q96CG8 243 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 GAL3ST4Q96RP7 486 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 OR10A5Q9H207 317 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 TUBB1Q9H4B7 451 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 MAT2BQ9NZL9 334 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 ZNF639Q9UID6 485 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 DNAJC15Q9Y5T4 150 aa23.01■■□□□ 1.27
PMS1-220ENST00000618056 ATP8B1O43520 1251 aa23■■□□□ 1.27
PMS1-220ENST00000618056 RRP9O43818 475 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms