RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 PEX16Q9Y5Y5 336 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 LYVE1Q9Y5Y7 322 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 A0A0G2JMP0 313 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 A0A1W2PS29 197 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 AKR7A2O43488 359 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 WBP4O75554 376 aaKnown RBP13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 UQCRC1P31930 480 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 SOX6P35712 828 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 SSR2P43308 183 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 ID2Q02363 134 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 ZNF763Q0D2J5 394 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 ATG9BQ674R7 924 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 TUBA3EQ6PEY2 450 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 GPR149Q86SP6 731 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 PTOV1Q86YD1 416 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 ZZZ3Q8IYH5 903 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 TAGAPQ8N103 731 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 OR9Q2Q8NGE9 314 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 ZCCHC10Q8TBK6 192 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 CCDC120Q96HB5 630 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 INSM2Q96T92 566 aaPredicted RBP13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 CNPPD1Q9BV87 410 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 CCNB1IP1Q9NPC3 277 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 DMRT3Q9NQL9 472 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 RABL2AQ9UBK7 228 aaPredicted RBP13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 FBXO9Q9UK97 447 aaPredicted RBP13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 PCDHB11Q9Y5F2 797 aa13.74□□□□□ -0.21
SHROOM1-208ENST00000617339 ZNF860A6NHJ4 632 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 BCHEP06276 602 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 JUNDP17535 347 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 DRD3P35462 400 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 CCDC28AQ8IWP9 274 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 OR4N5Q8IXE1 308 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 CAMKK1Q8N5S9 505 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 OR56A3Q8NH54 315 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 ZNF566Q969W8 418 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 VPS35Q96QK1 796 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 SLC30A2Q9BRI3 323 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 SIRT5Q9NXA8 310 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 TEX10Q9NXF1 929 aaPredicted RBP13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 CYP8B1Q9UNU6 501 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 SAMD4AQ9UPU9 718 aaKnown RBP13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 EXO1Q9UQ84 846 aaKnown RBP13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 PNMA8CA0A1B0GUJ8 204 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 CCNDBP1O95273 360 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 SOX14O95416 240 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 PTHP01270 115 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 ITGAMP11215 1152 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 IL18R1Q13478 541 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 IRF4Q15306 451 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 DEF8Q6ZN54 512 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 NLRP8Q86W28 1048 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 SPERTQ8NA61 448 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 SDHCQ99643 169 aaPredicted RBP13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 FAM25AB3EWG3 89 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 FAM25CB3EWG5 89 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 FAM25GB3EWG6 89 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 QSOX1O00391 747 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 PI15O43692 258 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 YES1P07947 543 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 TNFSF8P32971 234 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 TAS2R38P59533 333 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 PRKCDQ05655 676 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 KIAA1614Q5VZ46 1190 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 CEACAM20Q6UY09 585 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 SHISA5Q8N114 240 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 KIAA1958Q8N8K9 716 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 ANKRD53Q8N9V6 530 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 OR8K5Q8NH50 307 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 GPR151Q8TDV0 419 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 QRSL1Q9H0R6 528 aaKnown RBP13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 REEP4Q9H6H4 257 aa13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 SPATA6Q9NWH7 488 aaPredicted RBP13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 CRNNQ9UBG3 495 aaPredicted RBP13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 TDRD6O60522 2096 aaKnown RBP13.73□□□□□ -0.21
SHROOM1-208ENST00000617339 SLC16A5O15375 505 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 SCN2BO60939 215 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 CCNYL3P0C7X3 344 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 FADDQ13158 208 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 SCARB2Q14108 478 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 FGL2Q14314 439 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 BAK1Q16611 211 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 TSTQ16762 297 aaKnown RBP13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 GAB4Q2WGN9 574 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 ZNF776Q68DI1 518 aaPredicted RBP13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 FAAH2Q6GMR7 532 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 ARMC6Q6NXE6 501 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 SHQ1Q6PI26 577 aaKnown RBP13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 PARGQ86W56 976 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 ENTHD1Q8IYW4 607 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 DTX3Q8N9I9 347 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 C11orf65Q8NCR3 313 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 CHAC2Q8WUX2 184 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 PATE1Q8WXA2 126 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 RELTQ969Z4 430 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 C1QTNF7Q9BXJ2 289 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 KLHL31Q9H511 634 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 SLC13A4Q9UKG4 626 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 SSTR4P31391 388 aa13.72□□□□□ -0.21
SHROOM1-208ENST00000617339 OR3A3P47888 321 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms