RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 PCDHB11Q9Y5F2 797 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 C5P01031 1676 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 ACOD1A6NK06 481 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 hCG_2039718K7EN88 272 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 SEPT4O43236 478 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 UPP2O95045 317 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 ZBTB7AO95365 584 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 PRPS2P11908 318 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 RFC2P35250 354 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 SLC6A9P48067 706 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 COL19A1Q14993 1142 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 OR10Z1Q8NGY1 313 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 ARHGDIGQ99819 225 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 MAP4K5Q9Y4K4 846 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 SNED1Q8TER0 1413 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 LOC102723971A0A1B0GUV8 181 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 A0A1W2PPL8 197 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 METTL15A6NJ78 407 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 CHRM5P08912 532 aaPredicted RBP8.91□□□□□ -0.98
COL12A1-211ENST00000615798 APEHP13798 732 aaKnown RBP8.91□□□□□ -0.98
COL12A1-211ENST00000615798 HCAR3P49019 387 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 KIAA1161Q6NSJ0 714 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 LMX1AQ8TE12 382 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 NKX6-2Q9C056 277 aaPredicted RBP8.91□□□□□ -0.98
COL12A1-211ENST00000615798 MKS1Q9NXB0 559 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 SPHK1Q9NYA1 384 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 RNF181Q9P0P0 153 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 C2P06681 752 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 HLA-DOBP13765 273 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 ALDH7A1P49419 539 aaKnown RBP8.91□□□□□ -0.98
COL12A1-211ENST00000615798 SNTB2Q13425 540 aaKnown RBP8.91□□□□□ -0.98
COL12A1-211ENST00000615798 SLC39A13Q96H72 371 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 ADAD1Q96M93 576 aaKnown RBP8.91□□□□□ -0.98
COL12A1-211ENST00000615798 CADM1Q9BY67 442 aaKnown RBP8.91□□□□□ -0.98
COL12A1-211ENST00000615798 LRTM1Q9HBL6 345 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 ACP6Q9NPH0 428 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 PNPOQ9NVS9 261 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 TRPM6Q9BX84 2022 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 FANCGO15287 622 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 CHRNA1P02708 482 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 ZNF17P17021 662 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 GLUD2P49448 558 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 FAM180BQ6P0A1 224 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 MFSD6LQ8IWD5 586 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 ZSCAN4Q8NAM6 433 aaPredicted RBP8.9□□□□□ -0.98
COL12A1-211ENST00000615798 NEIL3Q8TAT5 605 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 GAB3Q8WWW8 586 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 RDH12Q96NR8 316 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 SOX17Q9H6I2 414 aaPredicted RBP8.9□□□□□ -0.98
COL12A1-211ENST00000615798 PDE7BQ9NP56 450 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 ACOXLQ9NUZ1 547 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 SLC2A6Q9UGQ3 507 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 ZNF701M0R085 212 aaPredicted RBP8.9□□□□□ -0.98
COL12A1-211ENST00000615798 CAP1Q01518 475 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 CST9LP1Q5W188 147 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 RNF215Q9Y6U7 377 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 PCNX2A6NKB5 2137 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 SMIM35A0A1B0GVV1 85 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 MROH6A6NGR9 719 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 WNT7AO00755 349 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 ATG13O75143 517 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 ALPIP09923 528 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 LEPRP48357 1165 aaKnown RBP8.9□□□□□ -0.98
COL12A1-211ENST00000615798 HOXA1P49639 335 aaPredicted RBP8.9□□□□□ -0.98
COL12A1-211ENST00000615798 NR0B1P51843 470 aaKnown RBP8.9□□□□□ -0.98
COL12A1-211ENST00000615798 RPL7AP62424 266 aaKnown RBP8.9□□□□□ -0.98
COL12A1-211ENST00000615798 KCNJ8Q15842 424 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 ZNF681Q96N22 645 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 ZNF582Q96NG8 517 aaPredicted RBP8.9□□□□□ -0.98
COL12A1-211ENST00000615798 NPHS1O60500 1241 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 MPSTP25325 297 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 TMEM183BQ1AE95 376 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 KIAA1614Q5VZ46 1190 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 BRICD5Q6PL45 260 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 GRAMD2AQ8IUY3 354 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 GID4Q8IVV7 300 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 ABCG5Q9H222 651 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 KCNIP1Q9NZI2 227 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.9□□□□□ -0.98
COL12A1-211ENST00000615798 NEMP2A6NFY4 417 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 RPLP1P05386 114 aaKnown RBP8.9□□□□□ -0.98
COL12A1-211ENST00000615798 CDK5Q00535 292 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 GAD2Q05329 585 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 PLA2G7Q13093 441 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 ACSBG2Q5FVE4 666 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 FAM69AQ5T7M9 428 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 AARSD1Q9BTE6 412 aaKnown RBP8.9□□□□□ -0.98
COL12A1-211ENST00000615798 RNF121Q9H920 327 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 SRA1Q9HD15 236 aaKnown RBP8.9□□□□□ -0.98
COL12A1-211ENST00000615798 KCNU1A8MYU2 1149 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 RPP14O95059 124 aaKnown RBP8.9□□□□□ -0.98
COL12A1-211ENST00000615798 ITPKBP27987 946 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 CCKARP32238 428 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 CASP9P55211 416 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 INHBEP58166 350 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 FAM183BPQ6ZVS7 135 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 C15orf54Q8N8G6 183 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 PARD6AQ9NPB6 346 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 BRWD1Q9NSI6 2320 aa8.9□□□□□ -0.98
COL12A1-211ENST00000615798 NAV1Q8NEY1 1877 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms