RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 TMEM107Q6UX40 140 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 NPWQ8N729 165 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 ZNF283Q8N7M2 679 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 DTWD2Q8NBA8 298 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 CHST4Q8NCG5 386 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 OR5L1Q8NGL2 311 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 OR52J3Q8NH60 311 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 CD320Q9NPF0 282 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 CENPMQ9NSP4 180 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 PARPBPQ9NWS1 579 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 OR6C76A6NM76 312 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 GNB5O14775 395 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 MSL3P1P0C860 447 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 ADARP55265 1226 aaKnown RBP9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 PITX1P78337 314 aaPredicted RBP9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 ADAM17P78536 824 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 DPTQ07507 201 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 RIN1Q13671 783 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 HACD2Q6Y1H2 254 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 GPR26Q8NDV2 337 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 DHRS4Q9BTZ2 278 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 TRIM8Q9BZR9 551 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 POLR2J2Q9GZM3 115 aaKnown RBP9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 NMUR2Q9GZQ4 415 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 MYH14Q7Z406 1995 aaKnown RBP9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 LOC102725191A0A1B0GVB3 256 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 H3BNX3 289 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 TEX46H3BTG2 121 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 C1orf105O95561 183 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 CYBRD1Q53TN4 286 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 AFMIDQ63HM1 303 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 SPTSSAQ969W0 71 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 FCRL3Q96P31 734 aaPredicted RBP9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 OR6C1Q96RD1 312 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 CHCHD6Q9BRQ6 235 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 LMF2Q9BU23 707 aaKnown RBP9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 RBCK1Q9BYM8 510 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 TM7SF3Q9NS93 570 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 GALR3O60755 368 aaPredicted RBP9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 EEDO75530 441 aaKnown RBP9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 WNT11O96014 354 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 PBX2P40425 430 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 MAGEA6P43360 314 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 ID2Q02363 134 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 EEF1A2Q05639 463 aaKnown RBP9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 QPRTQ15274 297 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 CXorf57Q6NSI4 855 aaKnown RBP9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 SHFQ7M4L6 423 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 NLRP8Q86W28 1048 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 FAM110BQ8TC76 370 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 IL17FQ96PD4 163 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 C1orf21Q9H246 121 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 NT5DC2Q9H857 520 aa9.27□□□□□ -0.93
TNFRSF9-204ENST00000615230 KDM4BO94953 1096 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 H2BFMP0C1H6 154 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 ADPRHP54922 357 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 TAZQ16635 292 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 GFOD2Q3B7J2 385 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 ABCA11PQ4W5N1 156 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 SLC22A16Q86VW1 577 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 PSD4Q8NDX1 1056 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 PPP1R35Q8TAP8 253 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 GAB3Q8WWW8 586 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 RLN3Q8WXF3 142 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 ALPK1Q96QP1 1244 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 SLCO1B3Q9NPD5 702 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 CCDC182A6NF36 153 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 CPSF4LA6NMK7 179 aaKnown RBP9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 CDC123O75794 336 aaPredicted RBP9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 STATHP02808 62 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 OR12D1P0DN82 309 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 TEAD1P28347 426 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 XCR1P46094 333 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 PCLAFQ15004 111 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 TYSND1Q2T9J0 566 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 FAM205BPQ63HN1 556 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 KLHL17Q6TDP4 642 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 WDR77Q9BQA1 342 aaPredicted RBP9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 WDR12Q9GZL7 423 aaKnown RBP9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 LRRN3Q9H3W5 708 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 ENY2Q9NPA8 101 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 TRPV5Q9NQA5 729 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 SMOXQ9NWM0 555 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 BLOC1S5-TXNDC5H3BN57 136 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 RNASET2O00584 256 aaKnown RBP9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 ZER1Q7Z7L7 766 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 GALNT5Q7Z7M9 940 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 SLC44A3Q8N4M1 653 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 HSH2DQ96JZ2 352 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 RDH12Q96NR8 316 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 ZNF317Q96PQ6 595 aaPredicted RBP9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 ZBTB26Q9HCK0 441 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 ACTR3BQ9P1U1 418 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 RABL2AQ9UBK7 228 aaPredicted RBP9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 ZDHHC2Q9UIJ5 367 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 RABL2BQ9UNT1 228 aa9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 CASC3O15234 703 aaKnown RBP9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 SMAD6O43541 496 aaKnown RBP9.26□□□□□ -0.93
TNFRSF9-204ENST00000615230 CREG1O75629 220 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms