RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 MARK4Q96L34 752 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 BRINP2Q9C0B6 783 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 OSGIN2Q9Y236 505 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 EXPH5Q8NEV8 1989 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 RGS16O15492 202 aaPredicted RBP5.27□□□□□ -1.57
CPNE3-208ENST00000614678 GMFGO60234 142 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 TRIM13O60858 407 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 GPR75O95800 540 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 CBX7O95931 251 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 IGHEP01854 428 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 BPGMP07738 259 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 GSTA1P08263 222 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 NT5EP21589 574 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 STT3AP46977 705 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 SERPINB4P48594 390 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 MAGOHP61326 146 aaKnown RBP5.27□□□□□ -1.57
CPNE3-208ENST00000614678 IGLV3-21P80748 117 aaPredicted RBP5.27□□□□□ -1.57
CPNE3-208ENST00000614678 ELAVL1Q15717 326 aaKnown RBP5.27□□□□□ -1.57
CPNE3-208ENST00000614678 PDCD2Q16342 344 aaPredicted RBP5.27□□□□□ -1.57
CPNE3-208ENST00000614678 ZNF324BQ6AW86 544 aaPredicted RBP5.27□□□□□ -1.57
CPNE3-208ENST00000614678 OR7G2Q8NG99 324 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 C16orf52Q8NHV5 167 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 RIT1Q92963 219 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 RBM18Q96H35 190 aaKnown RBP5.27□□□□□ -1.57
CPNE3-208ENST00000614678 NPLQ9BXD5 320 aaPredicted RBP5.27□□□□□ -1.57
CPNE3-208ENST00000614678 NXF5Q9H1B4 397 aaKnown RBP5.27□□□□□ -1.57
CPNE3-208ENST00000614678 DEFB127Q9H1M4 99 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 CLMPQ9H6B4 373 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 CXorf21Q9HAI6 301 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 GALNT9Q9HCQ5 603 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 ADAP2Q9NPF8 381 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 UTS2RQ9UKP6 389 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 ANXA4P09525 319 aaPredicted RBP5.27□□□□□ -1.57
CPNE3-208ENST00000614678 SFTPCP11686 197 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 CLCN2P51788 898 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 RPL38P63173 70 aaKnown RBP5.27□□□□□ -1.57
CPNE3-208ENST00000614678 RASA2Q15283 850 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 C3AR1Q16581 482 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 PRICKLE4Q2TBC4 344 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 SLC48A1Q6P1K1 146 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 TICAM1Q8IUC6 712 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 DDIASQ8IXT1 998 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 ZNF615Q8N8J6 731 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.27□□□□□ -1.57
CPNE3-208ENST00000614678 THOC1Q96FV9 657 aaKnown RBP5.27□□□□□ -1.57
CPNE3-208ENST00000614678 TEX37Q96LM6 180 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 FRMD6Q96NE9 622 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 DGAT2Q96PD7 388 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 ITPAQ9BY32 194 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 MAT2BQ9NZL9 334 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 C19orf25Q9UFG5 118 aaPredicted RBP5.27□□□□□ -1.57
CPNE3-208ENST00000614678 SNX6Q9UNH7 406 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 PCDHA9Q9Y5H5 950 aa5.27□□□□□ -1.57
CPNE3-208ENST00000614678 DOCK7Q96N67 2140 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 BLACEA4D250 179 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 LSM1O15116 133 aaKnown RBP5.26□□□□□ -1.57
CPNE3-208ENST00000614678 OR10H2O60403 315 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 SEC22BO75396 215 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 SP1P08047 785 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 ALOX15P16050 662 aaPredicted RBP5.26□□□□□ -1.57
CPNE3-208ENST00000614678 SDC1P18827 310 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 DIO3P55073 304 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 CASP8Q14790 479 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 EBPQ15125 230 aaKnown RBP5.26□□□□□ -1.57
CPNE3-208ENST00000614678 CCDC153Q494R4 210 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 HSDL2Q6YN16 418 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 CCDC91Q7Z6B0 441 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 CYP4Z2PQ8N1L4 340 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 OR7A2PQ8NGA2 310 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 TWIST2Q8WVJ9 160 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 UBE2E3Q969T4 207 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 SMC6Q96SB8 1091 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 SERPINI1Q99574 410 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 PITHD1Q9GZP4 211 aaPredicted RBP5.26□□□□□ -1.57
CPNE3-208ENST00000614678 ZNF446Q9NWS9 450 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 TRAF6Q9Y4K3 522 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 MPDZO75970 2070 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 INTS1Q8N201 2190 aaKnown RBP5.26□□□□□ -1.57
CPNE3-208ENST00000614678 GOLGA8QA0A0J9YX86 632 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 TMEM120BA0PK00 339 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 GOLGA8OA6NCC3 632 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 ANKUB1A6NFN9 424 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 GOLGA8NF8WBI6 632 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 AZIN1O14977 448 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 LRRTM2O43300 516 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 CDC40O60508 579 aaKnown RBP eCLIP5.26□□□□□ -1.57
CPNE3-208ENST00000614678 ZG16O60844 167 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 VPS4BO75351 444 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 CLDN1O95832 211 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 CD63P08962 238 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 DNAJB13P59910 316 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 SNTB1Q13884 538 aaKnown RBP5.26□□□□□ -1.57
CPNE3-208ENST00000614678 EXT1Q16394 746 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 MEP1AQ16819 746 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 IRAK1BP1Q5VVH5 260 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 KANK2Q63ZY3 851 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 NOXRED1Q6NXP6 359 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 TMEM107Q6UX40 140 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 NPSR1Q6W5P4 371 aa5.26□□□□□ -1.57
CPNE3-208ENST00000614678 MAVSQ7Z434 540 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms