RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 QRICH1Q2TAL8 776 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 ARHGAP11BQ3KRB8 267 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF697Q5TEC3 545 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 B3GNT9Q6UX72 402 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 LRRC28Q86X40 367 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-213ENST00000613099 MCATQ8IVS2 390 aaKnown RBP4.75□□□□□ -1.65
VPS13D-213ENST00000613099 CMIPQ8IY22 773 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 PNLDC1Q8NA58 520 aaKnown RBP4.75□□□□□ -1.65
VPS13D-213ENST00000613099 WDR48Q8TAF3 677 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 NT5C3BQ969T7 300 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 EPYCQ99645 322 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 OSBPL2Q9H1P3 480 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 CABIN1Q9Y6J0 2220 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 ACTBP60709 375 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ACTG1P63261 375 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 KCNC4Q03721 635 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 PTPN11Q06124 597 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CRY2Q49AN0 593 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 SLC39A12Q504Y0 691 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF585AQ6P3V2 769 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 TIPARPQ7Z3E1 657 aaKnown RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 RDH10Q8IZV5 341 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 DNAJC5GQ8N7S2 189 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF321PQ8N8H1 164 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 LFNGQ8NES3 379 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CCDC74AQ96AQ1 378 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 RSPRY1Q96DX4 576 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 SAMD10Q9BYL1 202 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 RPH3ALQ9UNE2 315 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 FHP07954 510 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 PSMB4P28070 264 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 BDKRB2P30411 391 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 PPM1AP35813 382 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 MTPNP58546 118 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF616Q08AN1 781 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF543Q08ER8 600 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 SYT12Q8IV01 421 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 PAQR8Q8TEZ7 354 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CHAC2Q8WUX2 184 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF395Q9H8N7 513 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ATXN7L1Q9ULK2 861 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 PCDHA2Q9Y5H9 948 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 POM121CA8CG34 1229 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ALPIP09923 528 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CD247P20963 164 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CDK2P24941 298 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CAMLGP49069 296 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 GNMTQ14749 295 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 PARP15Q460N3 678 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM205Q6UW68 189 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CPA6Q8N4T0 437 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 MS4A15Q8N5U1 240 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 SYT14Q8NB59 555 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 OR2L3Q8NG85 312 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 GAL3ST2Q9H3Q3 398 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ESRP2Q9H6T0 727 aaKnown RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 NOX3Q9HBY0 568 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 TVP23BQ9NYZ1 205 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 SH2B3Q9UQQ2 575 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 LNP1A1A4G5 178 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 PSMB1P20618 241 aaKnown RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 SLC6A3Q01959 620 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 GPR50Q13585 617 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ATAT1Q5SQI0 421 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 NMNAT1Q9HAN9 279 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 HMX1Q9NP08 348 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CXorf49A8MYA2 514 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 K7ERU9 68 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 PHOX2AO14813 284 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 DIRAS1O95057 198 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CCKARP32238 428 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 NRIP1P48552 1158 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 PRKAG1P54619 331 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 FOXO4P98177 505 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ATXN7L3Q14CW9 347 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM31Q5JXX7 168 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 LIPNQ5VXI9 398 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF551Q7Z340 670 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 TMED4Q7Z7H5 227 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 THEM5Q8N1Q8 247 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM174Q8WUU8 243 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 DPF1Q92782 380 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 TXN2Q99757 166 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 IPPKQ9H8X2 491 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 UCK1Q9HA47 277 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 GSN-AS1Q9NRJ2 163 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 GPR83Q9NYM4 423 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ELF5Q9UKW6 265 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 PIP5K1BO14986 540 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 TLX2O43763 284 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CNR1P21554 472 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 PRKACGP22612 351 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 ITPKAP23677 461 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 SRP9P49458 86 aaKnown RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CTAG1AP78358 180 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 CDK5Q00535 292 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 TLE2Q04725 743 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 PLEKHH3Q7Z736 793 aa4.74□□□□□ -1.65
VPS13D-213ENST00000613099 FBXO15Q8NCQ5 510 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM18Q96B42 140 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms