RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 DHRS4L1P0CG22 281 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 MAKP20794 623 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 TOMM20Q15388 145 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 FBXL19Q6PCT2 694 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 FAM151BQ6UXP7 276 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 AVL9Q8NBF6 648 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 MAL2Q969L2 176 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 GORASP2Q9H8Y8 452 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 KCNIP2Q9NS61 270 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 DHDHQ9UQ10 334 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 CACNA1SQ13698 1873 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 ARSBP15848 533 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 CNR1P21554 472 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 RNF4P78317 190 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 SF1Q15637 639 aaKnown RBP8.41□□□□□ -1.06
TTC28-208ENST00000612946 H3F3CQ6NXT2 135 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 FAM111BQ6SJ93 734 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 IFNLR1Q8IU57 520 aaPredicted RBP8.41□□□□□ -1.06
TTC28-208ENST00000612946 TTC9Q92623 222 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 ACDQ96AP0 544 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 V9GYS6 101 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 A0A087WZY1 265 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 ARHGAP33O14559 1287 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 ERAL1O75616 437 aaKnown RBP8.41□□□□□ -1.06
TTC28-208ENST00000612946 TAS2R39P59534 338 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 ZFP82Q8N141 532 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 PMEPA1Q969W9 287 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 MANBAO00462 879 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 BET1O15155 118 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 TGFB1I1O43294 461 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 TGFB1P01137 390 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 ZNF763Q0D2J5 394 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 PLPPR4Q7Z2D5 763 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 ZNF546Q86UE3 836 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 FOXRED2Q8IWF2 684 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 ARL6IP6Q8N6S5 226 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 SLC39A7Q92504 469 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 HAS2Q92819 552 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 TIMM22Q9Y584 194 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 KHNYNO15037 678 aaKnown RBP8.41□□□□□ -1.06
TTC28-208ENST00000612946 CSTBP04080 98 aaKnown RBP8.41□□□□□ -1.06
TTC28-208ENST00000612946 S100A7P31151 101 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 FKBP1AP62942 108 aaKnown RBP8.41□□□□□ -1.06
TTC28-208ENST00000612946 OPCMLQ14982 345 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 IQCJQ1A5X6 159 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 OR56A3Q8NH54 315 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 SFXN5Q8TD22 340 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 TMEM169Q96HH4 297 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 PINK1Q9BXM7 581 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 PAGE1O75459 146 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 OR2F2O95006 317 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 SLC35G6P0C7Q6 338 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 METTL15P1P0C7V9 234 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 NMBRP28336 390 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 TAGLN2P37802 199 aaKnown RBP8.41□□□□□ -1.06
TTC28-208ENST00000612946 OR1G1P47890 313 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 OR2F1Q13607 317 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 UNC5DQ6UXZ4 953 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 STT3BQ8TCJ2 826 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 SLC2A11Q9BYW1 496 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 RAB9BQ9NP90 201 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 KIF26BQ2KJY2 2108 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.41□□□□□ -1.06
TTC28-208ENST00000612946 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.41□□□□□ -1.06
TTC28-208ENST00000612946 GABRB3P28472 473 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 CHRNEQ04844 493 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 PHYKPLQ8IUZ5 450 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 LRRC56Q8IYG6 542 aaPredicted RBP8.41□□□□□ -1.06
TTC28-208ENST00000612946 KLHDC1Q8N7A1 406 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 DBF4BQ8NFT6 615 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 OR5H2Q8NGV7 314 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 RGS13O14921 159 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 AK1P00568 194 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 HTR1BP28222 390 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 TAS2R46P59540 309 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 SORDQ00796 357 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.41□□□□□ -1.069e-6■■■■□ 24.9
TTC28-208ENST00000612946 ZNF585AQ6P3V2 769 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 SERPINA11Q86U17 422 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 OR52E4Q8NGH9 312 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 OR56B2PQ8NGI1 322 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 CASTOR1Q8WTX7 329 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 MFSD3Q96ES6 412 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 MICU1Q9BPX6 476 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 MOXD2PA6NHM9 499 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 TAAR5O14804 337 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 GABARAPO95166 117 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 GANABQ14697 944 aaKnown RBP8.41□□□□□ -1.06
TTC28-208ENST00000612946 RAB35Q15286 201 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 KIAA1211LQ6NV74 962 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 PIGZQ86VD9 579 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 LSMEM1Q8N8F7 131 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 PGAP2Q9UHJ9 254 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 PRR36Q9H6K5 1346 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 NUP188Q5SRE5 1749 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 LAMB4A4D0S4 1761 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 CPED1A4D0V7 1026 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 C1QTNF3-AMACRE9PGA6 284 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 UBFD1O14562 309 aaKnown RBP8.41□□□□□ -1.06
TTC28-208ENST00000612946 B3GALT2O43825 422 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms