RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 SEMA3DO95025 777 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 IFNA14P01570 189 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 NR2F1P10589 423 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 RAB28P51157 221 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 ZNF846Q147U1 533 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 LTB4RQ15722 352 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 FRMD1Q8N878 549 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 ARSGQ96EG1 525 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 SLC35G5Q96KT7 338 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 MRPS30Q9NP92 439 aaKnown RBP13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 A4GALTQ9NPC4 353 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 FKBP14Q9NWM8 211 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 RWDD3Q9Y3V2 267 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 TBC1D3DA0A087WVF3 549 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 TBC1D3IA0A087WXS9 549 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 TBC1D3EA0A087X179 549 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 TBC1D3KA0A087X1G2 549 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 TBC1D3FA6NER0 549 aaPredicted RBP13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 ZAR1LA6NP61 321 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 TBC1D3LB9A6J9 549 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 DSCR3O14972 297 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 LRRTM2O43300 516 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 CHRM4P08173 479 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 TBC1D3HP0C7X1 549 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 COL9A1P20849 921 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 CXCR2P25025 360 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 TRIM23P36406 574 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 HMGA2P52926 109 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 TARDBPQ13148 414 aaKnown RBP eCLIP13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 SGCGQ13326 291 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 ARHGAP19Q14CB8 494 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 TBC1D3GQ6DHY5 549 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 TBC1D3CQ6IPX1 549 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 KIAA1161Q6NSJ0 714 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 TBC1D3Q8IZP1 549 aaPredicted RBP13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 KCT2Q8NC54 265 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 OR4E2Q8NGC2 313 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 MCFD2Q8NI22 146 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 PSMA8Q8TAA3 256 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 MYDGFQ969H8 173 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 ZBED6CLQ96FA7 236 aaPredicted RBP13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 BTBD1Q9H0C5 482 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 TMEM74BQ9NUR3 256 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 QPCTLQ9NXS2 382 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 OSGIN1Q9UJX0 560 aa13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 CAB39Q9Y376 341 aaPredicted RBP13.31□□□□□ -0.28
PCDHGA3-202ENST00000612467 K7EQS6 105 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 WWP2O00308 870 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 RPN2P04844 631 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 HMGN2P05204 90 aaKnown RBP13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 MAGEA8P43361 318 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 KCNJ5P48544 419 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 KCNC4Q03721 635 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 TBCEQ15813 527 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 TSTQ16762 297 aaKnown RBP13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 TRIM16LQ309B1 348 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 SLC46A3Q7Z3Q1 461 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 SFTPA2Q8IWL1 248 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 OR6T1Q8NGN1 323 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 SUN3Q8TAQ9 357 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 KAT2AQ92830 837 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 BBS4Q96RK4 519 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 DDX31Q9H8H2 851 aaKnown RBP13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 HMG20AQ9NP66 347 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 SLC35C2Q9NQQ7 365 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 APOBEC3BQ9UH17 382 aaKnown RBP13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 DPP7Q9UHL4 492 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 KCND3Q9UK17 655 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 NTNG1Q9Y2I2 539 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 TSC22D4Q9Y3Q8 395 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 ARHGEF17Q96PE2 2063 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 BTN3A3O00478 584 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 ZW10O43264 779 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 AIFM1O95831 613 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 APODP05090 189 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 ZNF12P17014 697 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 BUD31P41223 144 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 SOX3P41225 446 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 TOR1AIP1Q5JTV8 583 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 DCST1Q5T197 706 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 SYCE2Q6PIF2 218 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 ACOT4Q8N9L9 421 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 WDR36Q8NI36 951 aaKnown RBP13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 MS4A6EQ96DS6 147 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 PHOX2BQ99453 314 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 SLC17A9Q9BYT1 436 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 DSN1Q9H410 356 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 NEUROD4Q9HD90 331 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 PHPT1Q9NRX4 125 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 A4GNTQ9UNA3 340 aa13.3□□□□□ -0.28
PCDHGA3-202ENST00000612467 ISM1B1AKI9 464 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 RNGTTO60942 597 aaKnown RBP13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 H1F0P07305 194 aaKnown RBP13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 FRKP42685 505 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 PXNP49023 591 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 CDC42P60953 191 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 SLC13A2Q13183 592 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 LRRC32Q14392 662 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 SHHQ15465 462 aa13.29□□□□□ -0.28
PCDHGA3-202ENST00000612467 CARTPTQ16568 116 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms