RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 TRAV6A0A075B6T7 132 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 C2orf92A0A1B0GVN3 265 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 IRGMA1A4Y4 181 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 PLD2O14939 933 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 ZNF821O75541 412 aaPredicted RBP6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 C1orf105O95561 183 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 CYP17A1P05093 508 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 TGM4P49221 684 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 KCNJ10P78508 379 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 ZNF91Q05481 1191 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 SUZ12Q15022 739 aaKnown RBP6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 TRIM71Q2Q1W2 868 aaKnown RBP6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 SLC30A6Q6NXT4 461 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 CNKSR3Q6P9H4 555 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 C11orf88Q6PI97 169 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 SLCO4C1Q6ZQN7 724 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 OR4N5Q8IXE1 308 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 TIGD4Q8IY51 512 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 PEX5LQ8IYB4 626 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 KLHL36Q8N4N3 616 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 HDDC3Q8N4P3 179 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 OR4E2Q8NGC2 313 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 GRHL3Q8TE85 626 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 LMLNQ96KR4 655 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 MCHR1Q99705 422 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 WDR26Q9H7D7 661 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 TAS2R7Q9NYW3 318 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 CXXC1Q9P0U4 656 aaPredicted RBP6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 STUB1Q9UNE7 303 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 ZFR2Q9UPR6 939 aaKnown RBP6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 OR1A2Q9Y585 309 aa6.53□□□□□ -1.36
SYNPO2-206ENST00000610556 SH3D21A4FU49 640 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 NOTOA8MTQ0 251 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 H0YIV9 168 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 H3BSH0 61 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 AKAP8O43823 692 aaKnown RBP6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 WBP4O75554 376 aaKnown RBP6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 FCER2P06734 321 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 HOXC8P31273 242 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 CASP3P42574 277 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 ATP12AP54707 1039 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 SLAMF1Q13291 335 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 CAMK1Q14012 370 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 EIF4HQ15056 248 aaKnown RBP6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 KHDRBS2Q5VWX1 349 aaKnown RBP6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 PARS2Q7L3T8 475 aaKnown RBP6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 KLBQ86Z14 1044 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC39A11Q8N1S5 342 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC38A5Q8WUX1 472 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 POF1BQ8WVV4 589 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 FAM46AQ96IP4 442 aaKnown RBP6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 CXorf36Q9H7Y0 433 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 CUEDC1Q9NWM3 386 aaPredicted RBP6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 PCDHGA2Q9Y5H1 932 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 J3QLW9 94 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 NFATC1O95644 943 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 HLA-DPB1P04440 258 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 CLEC2LP0C7M8 214 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 ZNF19P17023 458 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 CST5P28325 142 aaPredicted RBP6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 ZFP36L2P47974 494 aaKnown RBP6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 MTNR1AP48039 350 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 DCDC1P59894 354 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 TAP2Q03519 686 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 ST3GAL3Q11203 375 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 C2orf27AQ580R0 203 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 TOR1AIP1Q5JTV8 583 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 NDUFAF5Q5TEU4 345 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 AGAP6Q5VW22 663 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 PAQR6Q6TCH4 344 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 KIAA1324Q6UXG2 1013 aaKnown RBP6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 CALHM3Q86XJ0 350 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 CPA6Q8N4T0 437 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC37A3Q8NCC5 494 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 ATP6V1C2Q8NEY4 427 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 YIPF6Q96EC8 236 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 TRMT2BQ96GJ1 504 aaKnown RBP6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 AGAP4Q96P64 663 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 DPH7Q9BTV6 452 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 ALOXE3Q9BYJ1 711 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 CHIAQ9BZP6 476 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 FBXO10Q9UK96 956 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 OR10H1Q9Y4A9 318 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 ASCC3Q8N3C0 2202 aaKnown RBP6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 A0A1W2PQ72 361 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 IGLON5A6NGN9 336 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 CACNB4O00305 520 aaPredicted RBP6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 NDUFB5O43674 189 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 FURINP09958 794 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 ACADMP11310 421 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 JUNDP17535 347 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 CD22P20273 847 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 GSTM3P21266 225 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 MAP2K3P46734 347 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC6A12P48065 614 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 DHCR24Q15392 516 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 LRRC26Q2I0M4 334 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 BICRALQ6AI39 1079 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 POMZP3Q6PJE2 187 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC36A4Q6YBV0 504 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms