RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 GTF2H2CQ6P1K8 395 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 ZDHHC24Q6UX98 284 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 SEM1Q6ZVN7 128 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 GOLGA7Q7Z5G4 137 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 TAGAPQ8N103 731 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 WDR20Q8TBZ3 569 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 DIO2Q92813 273 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 REPS1Q96D71 796 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 IPPKQ9H8X2 491 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 WDR41Q9HAD4 459 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 RYDENQ9NUL5 291 aaKnown RBP12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 PSD3Q9NYI0 1048 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 B4GALT7Q9UBV7 327 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 AKAP6Q13023 2319 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 A0A1W2PS29 197 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 HMX2A2RU54 273 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 ANKRD33BA6NCL7 494 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 HSPB2A8KAH6 182 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 CAPN14A8MX76 684 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 AHRRA9YTQ3 701 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 KDM4EB2RXH2 506 aaPredicted RBP12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 SYT5O00445 386 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 TP53I11O14683 189 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 UGDHO60701 494 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 TRIM3O75382 744 aaPredicted RBP12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 TRAPPC6AO75865 159 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 ACSL3O95573 720 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 AIFM1O95831 613 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 EPPINO95925 133 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 NR2F6P10588 404 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 GDF1P27539 372 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 SSTR4P31391 388 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 UQCRC1P31930 480 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 KIR2DL3P43628 341 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 DUSP8Q13202 625 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 HSPB2Q16082 182 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 HLA-DQA1Q5Y7H0 255 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 CCDC91Q7Z6B0 441 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 ZNF441Q8N8Z8 693 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 L3MBTL4Q8NA19 623 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 TNIP2Q8NFZ5 429 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 TP53INP1Q96A56 240 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 TIMP4Q99727 224 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 POLDIP3Q9BY77 421 aaKnown RBP12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 LIME1Q9H400 295 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 CXorf21Q9HAI6 301 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 SNX15Q9NRS6 342 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 CCM2LQ9NUG4 571 aaPredicted RBP12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 CPSF2Q9P2I0 782 aaKnown RBP12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 NPFFR2Q9Y5X5 522 aa12.28□□□□□ -0.44
POLR2J3-219ENST00000608621 ZFHX3Q15911 3703 aa12.27□□□□□ -0.44
POLR2J3-219ENST00000608621 A0A096LPK6 155 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 C15orf38-AP3S2A0A0A6YYH1 394 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 CCDC189A1A4V9 331 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 FOXE1O00358 373 aaPredicted RBP12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 DIAPH2O60879 1101 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 KLHL2O95198 593 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 SIX3O95343 332 aaPredicted RBP12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 CLDN9O95484 217 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 CT62P0C5K7 136 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 PIK3R1P27986 724 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 TYK2P29597 1187 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 CEACAM8P31997 349 aaPredicted RBP12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 WNT3P56703 355 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 FBXW4P57775 412 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 TBCELQ5QJ74 424 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 BICRALQ6AI39 1079 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 NUDT13Q86X67 352 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 RELL2Q8NC24 303 aaPredicted RBP12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 NAXEQ8NCW5 288 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 ATP6V1E2Q96A05 226 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 ZNF597Q96LX8 424 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 GPR78Q96P69 363 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 GNRHR2Q96P88 292 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 CDK15Q96Q40 435 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 GPATCH1Q9BRR8 931 aaKnown RBP12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 ANGPTL4Q9BY76 406 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 RAB17Q9H0T7 212 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 NOL11Q9H8H0 719 aaKnown RBP12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 ZNF358Q9NW07 568 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 TEX10Q9NXF1 929 aaPredicted RBP12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 CRIM1Q9NZV1 1036 aa12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 TNPO3Q9Y5L0 923 aaKnown RBP12.27□□□□□ -0.45
POLR2J3-219ENST00000608621 MPDZO75970 2070 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 MAP1AP78559 2803 aaPredicted RBP12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 OR7A17O14581 309 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 DVL2O14641 736 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 SNX4O95219 450 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 CD99P14209 185 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 BMP5P22003 454 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 ARL1P40616 181 aaPredicted RBP12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 XKP51811 444 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 CRYZQ08257 329 aaKnown RBP12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 FUT7Q11130 342 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 RPS6KA2Q15349 733 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 UAP1Q16222 522 aaPredicted RBP12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 FNDC7Q5VTL7 733 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 OR52E8Q6IFG1 317 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 KLC3Q6P597 504 aa12.26□□□□□ -0.45
POLR2J3-219ENST00000608621 PACS2Q86VP3 889 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms