RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 CDKN2CP42773 168 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 MANFP55145 182 aaKnown RBP7.17□□□□□ -1.26
MSH6-211ENST00000606499 HBA1P69905 142 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 TLE3Q04726 772 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 MGAT2Q10469 447 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 CDC20Q12834 499 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 GAB1Q13480 694 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 SSPNQ14714 243 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 EXOSC7Q15024 291 aaKnown RBP7.17□□□□□ -1.26
MSH6-211ENST00000606499 PRICKLE4Q2TBC4 344 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 VPS26BQ4G0F5 336 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 ZNF628Q5EBL2 1059 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 FAM111BQ6SJ93 734 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 TMEM107Q6UX40 140 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 RAB43Q86YS6 212 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 GALNT12Q8IXK2 581 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 SAMD14Q8IZD0 417 aaPredicted RBP7.17□□□□□ -1.26
MSH6-211ENST00000606499 VWA5B2Q8N398 1253 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 FITM2Q8N6M3 262 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 ZNF321PQ8N8H1 164 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 OR4A15Q8NGL6 344 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 OR5AK3PQ8NH89 298 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 ZFP28Q8NHY6 868 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 RIT1Q92963 219 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 ERP27Q96DN0 273 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 ZBED6CLQ96FA7 236 aaPredicted RBP7.17□□□□□ -1.26
MSH6-211ENST00000606499 LRRC37BQ96QE4 947 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 PELOQ9BRX2 385 aaKnown RBP7.17□□□□□ -1.26
MSH6-211ENST00000606499 INPP5KQ9BT40 448 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 EFHD1Q9BUP0 239 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 CNPPD1Q9BV87 410 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 OR8D2Q9GZM6 311 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 ZNF700Q9H0M5 742 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 CXorf36Q9H7Y0 433 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 CXorf21Q9HAI6 301 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 ZNF160Q9HCG1 818 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 CPNE5Q9HCH3 593 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 SERHLQ9NQF3 203 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 SLC6A13Q9NSD5 602 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 SIRT3Q9NTG7 399 aaPredicted RBP7.17□□□□□ -1.26
MSH6-211ENST00000606499 ACSS1Q9NUB1 689 aaPredicted RBP7.17□□□□□ -1.26
MSH6-211ENST00000606499 FAM120CQ9NX05 1096 aaKnown RBP7.17□□□□□ -1.26
MSH6-211ENST00000606499 P4HTMQ9NXG6 502 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 MAT2BQ9NZL9 334 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 ERVK-11Q9UQG0 969 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 ERVK-19Q9WJR5 959 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 CLCA3PQ9Y6N3 262 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 AHCTF1Q8WYP5 2266 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 APC2O95996 2303 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 KALRNO60229 2985 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 NSG1A0A0A6YYJ2 146 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 LOC100653049A0A140TA62 436 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 PRSS51A0A1B0GVH4 220 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 SYNDIG1LA6NDD5 238 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 ZNF891A8MT65 544 aaPredicted RBP7.16□□□□□ -1.26
MSH6-211ENST00000606499 CAPN14A8MX76 684 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 RNASET2O00584 256 aaKnown RBP7.16□□□□□ -1.26
MSH6-211ENST00000606499 FBP2O00757 339 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 PCDH17O14917 1159 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 ANGPT2O15123 496 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 SLC22A2O15244 555 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 CFLARO15519 480 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 NME6O75414 186 aaPredicted RBP7.16□□□□□ -1.26
MSH6-211ENST00000606499 KRT34O76011 436 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 CPSF4O95639 269 aaKnown RBP7.16□□□□□ -1.26
MSH6-211ENST00000606499 CBX7O95931 251 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 C1QCP02747 245 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 CLPSP04118 112 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 GSNP06396 782 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 SNRPB2P08579 225 aaKnown RBP7.16□□□□□ -1.26
MSH6-211ENST00000606499 COX4I1P13073 169 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 SSTR4P31391 388 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 SOAT1P35610 550 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 SLC26A5P58743 744 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 Q0VFX4 171 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 CHAF1BQ13112 559 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 DUSP8Q13202 625 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 BIKQ13323 160 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 ZNF267Q14586 743 aaPredicted RBP7.16□□□□□ -1.26
MSH6-211ENST00000606499 MLC1Q15049 377 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 TLR1Q15399 786 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 MAPKAPK3Q16644 382 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 SPRED3Q2MJR0 410 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 BTBD16Q32M84 506 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 TRMT12Q53H54 448 aaKnown RBP7.16□□□□□ -1.26
MSH6-211ENST00000606499 PAGE3Q5JUK9 113 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 C6orf10Q5SRN2 563 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 FHL5Q5TD97 284 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 C6orf163Q5TEZ5 329 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 ANXA8L1Q5VT79 327 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 CCDC81Q6ZN84 652 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 SZRD1Q7Z422 152 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 RETREG3Q86VR2 466 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 CLEC4FQ8N1N0 589 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 KIF2BQ8N4N8 673 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 NFAM1Q8NET5 270 aaPredicted RBP7.16□□□□□ -1.26
MSH6-211ENST00000606499 OR7G2Q8NG99 324 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 OR14A16Q8NHC5 309 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 SLC2A12Q8TD20 617 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 ZNF675Q8TD23 568 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms