RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 UTP20O75691 2785 aaKnown RBP13.35□□□□□ -0.27
TUBE1-208ENST00000604743 ICE1Q9Y2F5 2266 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 ASPDHA6ND91 283 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 GOLGA6L10A6NI86 522 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 G3V3Y1 287 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 KLRC4-KLRK1H3BQV0 150 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 AZIN1O14977 448 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 PEX1O43933 1283 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 ANXA4P09525 319 aaPredicted RBP13.34□□□□□ -0.27
TUBE1-208ENST00000604743 CSNK2A2P19784 350 aaPredicted RBP13.34□□□□□ -0.27
TUBE1-208ENST00000604743 GALNSP34059 522 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 SLC37A1P57057 533 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 PIGGQ5H8A4 983 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 CEP85LQ5SZL2 805 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 FAM111BQ6SJ93 734 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 OPN5Q6U736 354 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 ZCCHC23Q6ZST2 131 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 PSD4Q8NDX1 1056 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 ADCY4Q8NFM4 1077 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 NUBPLQ8TB37 319 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 SSC4DQ8WTU2 575 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 EXOSC8Q96B26 276 aaKnown RBP13.34□□□□□ -0.27
TUBE1-208ENST00000604743 ZIM3Q96PE6 472 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 RRAGDQ9NQL2 400 aaPredicted RBP13.34□□□□□ -0.27
TUBE1-208ENST00000604743 SH3BGRL2Q9UJC5 107 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 UTS2RQ9UKP6 389 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 SLC5A6Q9Y289 635 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 POLR3HQ9Y535 204 aaPredicted RBP13.34□□□□□ -0.27
TUBE1-208ENST00000604743 PTGDR2Q9Y5Y4 395 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 ZNF780BQ9Y6R6 833 aa13.34□□□□□ -0.27
TUBE1-208ENST00000604743 C2orf92A0A1B0GVN3 265 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 SERTM1A2A2V5 107 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 LRRTM2O43300 516 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 CTIFO43310 598 aaKnown RBP13.33□□□□□ -0.28
TUBE1-208ENST00000604743 CLPSP04118 112 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 TUBBP07437 444 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 CHRNGP07510 517 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 RNF224P0DH78 156 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 ZNF24P17028 368 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 DUSP2Q05923 314 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 C2orf80Q0P641 193 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 EBPQ15125 230 aaKnown RBP13.33□□□□□ -0.28
TUBE1-208ENST00000604743 LTB4RQ15722 352 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 MPEG1Q2M385 716 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 RNFT1Q5M7Z0 435 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 C1QL3Q5VWW1 255 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 HLA-DQA1Q5Y7H0 255 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 RTL4Q6ZR62 310 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 GPALPP1Q8IXQ4 340 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 SLC22A8Q8TCC7 542 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 AGR3Q8TD06 166 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 WWTR1Q9GZV5 400 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 OR10A5Q9H207 317 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 DEPPQ9NTK1 212 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 BCAP29Q9UHQ4 241 aa13.33□□□□□ -0.28
TUBE1-208ENST00000604743 SPTBN1Q01082 2364 aaKnown RBP13.33□□□□□ -0.28
TUBE1-208ENST00000604743 ZNF407Q9C0G0 2248 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 TRGV8A0A0C4DH27 118 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 WDR91A4D1P6 747 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 OR6C76A6NM76 312 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 TMEM233B4DJY2 109 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 TFECO14948 347 aaPredicted RBP13.32□□□□□ -0.28
TUBE1-208ENST00000604743 ZNHIT1O43257 154 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 TYROBPO43914 113 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 NPHS1O60500 1241 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 SEC22BO75396 215 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 CHEK2O96017 543 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 LINC00032P0C843 101 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 DRD2P14416 443 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 NR0B1P51843 470 aaKnown RBP13.32□□□□□ -0.28
TUBE1-208ENST00000604743 PLGLB1Q02325 96 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 RBPJQ06330 500 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 ZNF763Q0D2J5 394 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 HEPACAMQ14CZ8 416 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 EXOSC7Q15024 291 aaKnown RBP13.32□□□□□ -0.28
TUBE1-208ENST00000604743 ARL13AQ5H913 290 aaPredicted RBP13.32□□□□□ -0.28
TUBE1-208ENST00000604743 TMEM64Q6YI46 380 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 TRIM46Q7Z4K8 759 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 FJX1Q86VR8 437 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 CCDC116Q8IYX3 515 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 LRRC25Q8N386 305 aaPredicted RBP13.32□□□□□ -0.28
TUBE1-208ENST00000604743 VWA5B2Q8N398 1253 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 OR5M3Q8NGP4 307 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 CNRIP1Q96F85 164 aaPredicted RBP13.32□□□□□ -0.28
TUBE1-208ENST00000604743 PKNOX2Q96KN3 472 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 GPR137Q96N19 417 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 TRMOQ9BU70 441 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 EML4Q9HC35 981 aaKnown RBP13.32□□□□□ -0.28
TUBE1-208ENST00000604743 SENP1Q9P0U3 644 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 DNAJC13O75165 2243 aa13.32□□□□□ -0.28
TUBE1-208ENST00000604743 SPTAN1Q13813 2472 aaKnown RBP13.32□□□□□ -0.28
TUBE1-208ENST00000604743 FREM3P0C091 2139 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 EXPH5Q8NEV8 1989 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 A0A0G2JMM0 328 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 A0A1W2PPB8 328 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 A0A1W2PRS3 328 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 A1L4Q6 167 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 PINLYPA6NC86 204 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 KIR3DP1A8MWS1 328 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 SLC28A1O00337 649 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms