RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 PRAMEF5Q5TYX0 476 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 PRAMEF9Q5VWM5 478 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 KHDRBS2Q5VWX1 349 aaKnown RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 PRAMEF6Q5VXH4 476 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 SEL1L3Q68CR1 1132 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 HEPHL1Q6MZM0 1159 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 ANKRD54Q6NXT1 300 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 MSANTD2Q6P1R3 559 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 KLHL17Q6TDP4 642 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 SH2D5Q6ZV89 423 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 FAM129CQ86XR2 697 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 AMER2Q8N7J2 671 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 ZNF431Q8TF32 576 aaPredicted RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 CANT1Q8WVQ1 401 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 RLN3Q8WXF3 142 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 BRI3BPQ8WY22 251 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 PIGKQ92643 395 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 CORO2AQ92828 525 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 YIPF6Q96EC8 236 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 IGSF21Q96ID5 467 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 C12orf66Q96MD2 445 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 APOL2Q9BQE5 337 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 WDR11Q9BZH6 1224 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 MTIF3Q9H2K0 278 aaKnown RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 ANKRD19PQ9H560 264 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 GAREM1Q9H706 876 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 ANKRA2Q9H9E1 313 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 CARS2Q9HA77 564 aaKnown RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 EQTNQ9NQ60 294 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 KLHL1Q9NR64 748 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 PDE10AQ9Y233 779 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 POFUT2Q9Y2G5 429 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 PUS1Q9Y606 427 aaKnown RBP eCLIP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 A3GALT2U3KPV4 340 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 FER1L6Q2WGJ9 1857 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 UBR3Q6ZT12 1888 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 A0A0U1RQS6 177 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 MPTX1A8MV57 137 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 RPP40O75818 363 aaKnown RBP4.49□□□□□ -1.69
LINC01109-201ENST00000603837 DDAH2O95865 285 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 CH25HO95992 272 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 FGBP02675 491 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 ADRB1P08588 477 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 SBK2P0C263 348 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 OR4E1P0C645 316 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 LAMP2P13473 410 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 PSMB9P28065 219 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 HOXA7P31268 230 aaPredicted RBP4.49□□□□□ -1.69
LINC01109-201ENST00000603837 DLSTP36957 453 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 CEACAM3P40198 252 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 RAB25P57735 213 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 GPC5P78333 572 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 SLC10A2Q12908 348 aaPredicted RBP4.49□□□□□ -1.69
LINC01109-201ENST00000603837 EPS8Q12929 822 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 ORC2Q13416 577 aaPredicted RBP4.49□□□□□ -1.69
LINC01109-201ENST00000603837 PWP1Q13610 501 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 SNTB1Q13884 538 aaKnown RBP4.49□□□□□ -1.69
LINC01109-201ENST00000603837 BOP1Q14137 746 aaKnown RBP4.49□□□□□ -1.69
LINC01109-201ENST00000603837 TFDP2Q14188 446 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 INPP5AQ14642 412 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 SPOUT1Q5T280 376 aaKnown RBP4.49□□□□□ -1.69
LINC01109-201ENST00000603837 ANGEL2Q5VTE6 544 aaKnown RBP4.49□□□□□ -1.69
LINC01109-201ENST00000603837 LRRC8EQ6NSJ5 796 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 GJB7Q6PEY0 223 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 METAP1DQ6UB28 335 aaPredicted RBP4.49□□□□□ -1.69
LINC01109-201ENST00000603837 ATRAIDQ6UW56 229 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 RBMS3Q6XE24 437 aaKnown RBP4.49□□□□□ -1.69
LINC01109-201ENST00000603837 HSDL2Q6YN16 418 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 KCTD1Q719H9 257 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 PIGZQ86VD9 579 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 HIPK1Q86Z02 1210 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 ADHFE1Q8IWW8 467 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 BOD1L2Q8IYS8 172 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 C8orf59Q8N0T1 100 aaPredicted RBP4.49□□□□□ -1.69
LINC01109-201ENST00000603837 TMEM132CQ8N3T6 1108 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 C4orf32Q8N8J7 132 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 WDR36Q8NI36 951 aaKnown RBP4.49□□□□□ -1.69
LINC01109-201ENST00000603837 OLIG1Q8TAK6 271 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 BRIX1Q8TDN6 353 aaKnown RBP4.49□□□□□ -1.69
LINC01109-201ENST00000603837 CPA5Q8WXQ8 436 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 KAT5Q92993 513 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 CENPNQ96H22 339 aaPredicted RBP4.49□□□□□ -1.69
LINC01109-201ENST00000603837 PPP3R2Q96LZ3 170 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 CCNL2Q96S94 520 aaPredicted RBP4.49□□□□□ -1.69
LINC01109-201ENST00000603837 LGMNQ99538 433 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 GPR87Q9BY21 358 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 REG4Q9BYZ8 158 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 CPEB1Q9BZB8 566 aaKnown RBP4.49□□□□□ -1.69
LINC01109-201ENST00000603837 EXO5Q9H790 373 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 RNF121Q9H920 327 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 ASCL3Q9NQ33 180 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 ERVK13-1Q9NX77 482 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 USP36Q9P275 1121 aaKnown RBP4.49□□□□□ -1.69
LINC01109-201ENST00000603837 EPHA6Q9UF33 1036 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 SHOC2Q9UQ13 582 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 SLC5A6Q9Y289 635 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 LYVE1Q9Y5Y7 322 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 TUBAL3A6NHL2 446 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 E9PAM4 449 aa4.49□□□□□ -1.69
LINC01109-201ENST00000603837 SMIM22K7EJ46 135 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms