RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 BLOC1S5Q8TDH9 187 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 PROX1Q92786 737 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 THOC3Q96J01 351 aaKnown RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 LURAP1Q96LR2 239 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ZNF512Q96ME7 567 aaPredicted RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 NPAS2Q99743 824 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 OSBPL11Q9BXB4 747 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 SLCO5A1Q9H2Y9 848 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ASB7Q9H672 318 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ESRP2Q9H6T0 727 aaKnown RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 EFCAB1Q9HAE3 211 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 LRRC4Q9HBW1 653 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 CHST11Q9NPF2 352 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 BIN3Q9NQY0 253 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 PLCXD1Q9NUJ7 323 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 MRPS18AQ9NVS2 196 aaKnown RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ERAP1Q9NZ08 941 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 LGALS13Q9UHV8 139 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 CDH22Q9UJ99 828 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 NDUFAF1Q9Y375 327 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 CACNA1FO60840 1977 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 SSC5DA1L4H1 1573 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 EDC4Q6P2E9 1401 aaKnown RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 KAT6AQ92794 2004 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 UTYO14607 1347 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 FAM90A8PA6NJQ4 464 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 LPXNO60711 386 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 AVILO75366 819 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 SH3BGRLO75368 114 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 CALCAP01258 141 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 SBK3P0C264 359 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 FAM90A13PP0C7W8 464 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 FAM90A24PP0C7X0 464 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 STAG3L1P0CL83 205 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 CYP2D6P10635 497 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 IFI30P13284 250 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ZNF250P15622 560 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ACO1P21399 889 aaKnown RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 FPR1P21462 350 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 WARSP23381 471 aaKnown RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 FPR2P25090 351 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 OR1E1P30953 314 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 CD79BP40259 229 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 KPNA2P52292 529 aaKnown RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ATP5IP56385 69 aaPredicted RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 PPIAP62937 165 aaKnown RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 SEMA3BQ13214 749 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ALKBH1Q13686 389 aaKnown RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 PRKD1Q15139 912 aaPredicted RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 SEL1L2Q5TEA6 688 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 GPR107Q5VW38 600 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 KRT39Q6A163 491 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 C17orf99Q6UX52 265 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 SSX9Q7RTT3 188 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 SNX20Q7Z614 316 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ADGRD2Q7Z7M1 963 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 TRABD2AQ86V40 505 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 C1orf210Q8IVY1 113 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 CCDC60Q8IWA6 550 aaPredicted RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 PNPT1Q8TCS8 783 aaKnown RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 EXOSC8Q96B26 276 aaKnown RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ULK4Q96C45 1275 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 SLC25A36Q96CQ1 311 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ZNF48Q96MX3 618 aaPredicted RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 NPAS1Q99742 590 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 SSX3Q99909 188 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 THTPAQ9BU02 230 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 SHARPINQ9H0F6 387 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 SPG21Q9NZD8 308 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ZNF224Q9NZL3 707 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 BTNL2Q9UIR0 455 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 CDH9Q9ULB4 789 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 CA14Q9ULX7 337 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 SLC5A6Q9Y289 635 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 MRPS33Q9Y291 106 aaKnown RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 STARD10Q9Y365 291 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 RNF11Q9Y3C5 154 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 GRIP1Q9Y3R0 1128 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 MAB21L2Q9Y586 359 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 CFAP20Q9Y6A4 193 aaKnown RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 PTPRFP10586 1907 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 A0A1B0GV90 55 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 A0A1W2PR77 199 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 A6NNC1 897 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 AIM2O14862 343 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 SEC14L2O76054 403 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 PDE9AO76083 593 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 MMP1P03956 469 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 KLK3P07288 261 aaPredicted RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 GP1BAP07359 652 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 NCK1P16333 377 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ZNF8P17098 575 aaPredicted RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 GCAP28676 217 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 GRIA1P42261 906 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 RAB28P51157 221 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 RAB11AP62491 216 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 CSNK2A1P68400 391 aaPredicted RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 REEP5Q00765 189 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 RGS1Q08116 209 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 TNK1Q13470 666 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms